Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2778 |
Symbol | |
ID | 5085131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2822220 |
End bp | 2823647 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640484342 |
Product | putative oxidoreductase |
Protein accession | YP_001168970 |
Protein GI | 146278811 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.903592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAG AACCGATGCT CCAGTTCGTC AAGATGGCGA GGGAGACCCC CGAGAAACGT CCGGCCAACC TGCGGTCGCA CGATTTCCAT GAGATCTACC GCGAGTTCGC CGCTGCCAAG GCCGCCGAGC AAGCCAGCCG CTGCAGCCAG TGCGGTGTTC CCTTCTGCCA GTCGCACTGC CCGCTGCACA ACAACATTCC CGACTGGCTG CGCCTGACCG CCACGGGCCG GCTTCAGGAA GCCTACGAGA TCAGCCAGGC CACCAACACC TTCCCCGAGA TCTGCGGCCG CATCTGCCCG CAGGACCGTC TGTGCGAGGG CAACTGCGTG ATCGAGCAGT CGGGCCACGG CACGGTGACC ATCGGCGCGG TCGAGAAATA CATCACGGAC ATGGCCTGGG AGAACGGCTG GGTGACGCCC GGCCGCCCCA TGCACGAGCG GTCGGAATCG GTGGGCATCA TCGGGGCAGG GCCGGGGGGG CTTGCCGCCG CCGATGCGCT GCGCCGCGCC GGGCTTCAGG TCACGGTCTA TGACCGCTAC GACCGGGCCG GCGGCCTGCT GACCTACGGC ATTCCCGGCT TCAAGCTGGA GAAGGACGTG GTCATGCGCC GCGTCGAGCA GCTCGAGCAG GCGGGCGTGC AATTCGTGCT CAACTGCAAT GTGGGCGAGG ATCTCAGCTT CGACGCGATC CGGGGCCAGC ATGACGCGGT GCTGATCGCG ACGGGCGTGT ACAAGCAGCG CGACCTTGCG GCGCCGGGCG TGGGCTCGGC GGGCGTGGTG CAGGCGCTCG ACTATCTGAC CCTGTCCAAT CGGCGCAGCT TCGGCGACGA GGTCGATGCC GACGGGCTTG ATGCCAGCGG CAAGCGCGTC GTGGTGATCG GCGGCGGCGA CACGGCGATG GACTGCGTGC GCACCGCCAT CCGTCAGGGC GCCACCAGCG TGAAGTGCCT CTATCGCCGC GACCGGGCCA ACATGCCGGG CTCGCAGCGC GAGGTCGCCA ACGCCGAGGA GGAAGGTGTC GAGTTCGTCT GGCTCGCGGC GCCGCGCGGT TTCATTGCGG GCGACGCGGT CGAGGGCGTG ATCGTGCAGA AGATGCGGCT TGGCGAGCCC GACGCATCCG GCCGGCAGAT GCCCGAGGTG ATCGAAGGCG CCGACTATGT CGAGCCGGCC GATCTCGCCA TCATGGCGCT GGGCTTCGAG CCCGAGGATC TGCCGACCCT CTGGGGTGTG CCCGAACTGG CCGTGACGCG CTGGGGCACG ATCAAGGCCG ACTTCCGCAC CCATGCGACC AGCCTGCCCG GCGTTTATGC CGTGGGCGAC ATCGTGCGGG GCGCGAGCCT CGTCGTCTGG GCCATCCGCG ACGGCCGCGA AGCGGCGGAC GCGATCCTCG ACTATCTGGC GCAACCGGCC ATCGCCGCGG CCGAATAG
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Protein sequence | MAKEPMLQFV KMARETPEKR PANLRSHDFH EIYREFAAAK AAEQASRCSQ CGVPFCQSHC PLHNNIPDWL RLTATGRLQE AYEISQATNT FPEICGRICP QDRLCEGNCV IEQSGHGTVT IGAVEKYITD MAWENGWVTP GRPMHERSES VGIIGAGPGG LAAADALRRA GLQVTVYDRY DRAGGLLTYG IPGFKLEKDV VMRRVEQLEQ AGVQFVLNCN VGEDLSFDAI RGQHDAVLIA TGVYKQRDLA APGVGSAGVV QALDYLTLSN RRSFGDEVDA DGLDASGKRV VVIGGGDTAM DCVRTAIRQG ATSVKCLYRR DRANMPGSQR EVANAEEEGV EFVWLAAPRG FIAGDAVEGV IVQKMRLGEP DASGRQMPEV IEGADYVEPA DLAIMALGFE PEDLPTLWGV PELAVTRWGT IKADFRTHAT SLPGVYAVGD IVRGASLVVW AIRDGREAAD AILDYLAQPA IAAAE
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