| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2647 |
|---|
| Symbol | |
|---|
| ID | 5084435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2687676 |
|---|
| End bp | 2688932 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640484210 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001168839 |
|---|
| Protein GI | 146278680 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0228439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.825958 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATG TCGCCCCGCG CCGATCCGCC GCTTGCTCGC GGCATGTGCT GGTCGTGGAT
GACAGCCGCG CCCAGCGGCG GCTGCTCGCG CTGTCGCTCA GGCGCTGGGG CTATCGCGTC
AGCGAGGCCG CCGGGGCCGA CGAGGCGCTG GACCTGTGCC GCACGGCGGG TATCGACATC
GTGCTGAGCG ACTGGATGAT GCCGGGCCTC TCGGGGCTTG ACCTGTGTCG CCTCATCCGG
GCGCTTCCAC GGGAAAACTA CTGCTATTTC ATCCTGCTGA CCTCGCGTTC GGGCACGGGT
GAGGTCGTGG ACGGCCTCGA TTGCGGGGCT GACGACTATC TCGTCAAGCC CGTCGCATCC
GGCGAACTTC GCGCCCGGCT GCGCGCCGGT GAGCGCGTGC TGGGGATGCA GGCCGAGCTG
GTGGGCAAGA ACCACCTGCT CGAAGAGGCC TTCGGCGAAC TGCGCGCCGT CTATGAGACG
CTCGATCGCG ACCTGATCGA GGCCCGCAAG CTGCAGCAGT CGCTCGCGCG GGACCGGCAC
CGGCGGTTCG GCAACTCGAC CGCCACGCTC CTGATGCGGC CTTCGGGCAG GGTCGGCGGG
GATCTGGCGG GCTCGTTCGA GATCGCGACC GGGCGAGTCG CCATCTACTC GATCGATGTC
TCGGGCCATG GCGTCGCCTC GGCGCTGATG ACGGCGCGGC TGGCGGGGCT GCTCTCGGGT
GTCTCTCCCG ACCGGAACTT CGCGTTGACA GGTGGCAACT GCTATCGGTG CAAGGGGCGG
CAGACCTGGC CGCCCGACAT GGTGGCAAGC CGGTTCAACC GCATGATGCT CGAAGAGCTG
CAGGTCGATC AGTACTTCAC CATGGCCTAT GCCGAGATCG ATCTCGACAC CGGACGGGTG
GAACTGGTTC AGGCGGGTCA TCCGCACCCC GTGGTGATGC GCGCCGACGG CACGATCGAG
ATGTTGGGGC AGGGCGGCCT GCCGATCGGC CTGATCCCGG ATGCCAGCTA CGAGCGCACC
GAATGTCGCC TCGCGCCGGG CGACCGGGTG CTTCTGCTGT CGGACGGGGT GACGGAATGT
CCCGACGTCG CGGGTCATGC ACTGGGAGAG GAAGGTCTTG CGACGCTGCT GCACGCCAAT
GCGGGGCTGA ACCCCGAGGC GCTGATGGAG GCGCTGGTCT GGTCGCTCCA CGACCGGATG
GGGCGTGCGG ATCTTCGGGA CGATGTCTCG GGGGTGATGT TCGACTACCG TCCCTGA
|
|---|
| Protein sequence | MTDVAPRRSA ACSRHVLVVD DSRAQRRLLA LSLRRWGYRV SEAAGADEAL DLCRTAGIDI
VLSDWMMPGL SGLDLCRLIR ALPRENYCYF ILLTSRSGTG EVVDGLDCGA DDYLVKPVAS
GELRARLRAG ERVLGMQAEL VGKNHLLEEA FGELRAVYET LDRDLIEARK LQQSLARDRH
RRFGNSTATL LMRPSGRVGG DLAGSFEIAT GRVAIYSIDV SGHGVASALM TARLAGLLSG
VSPDRNFALT GGNCYRCKGR QTWPPDMVAS RFNRMMLEEL QVDQYFTMAY AEIDLDTGRV
ELVQAGHPHP VVMRADGTIE MLGQGGLPIG LIPDASYERT ECRLAPGDRV LLLSDGVTEC
PDVAGHALGE EGLATLLHAN AGLNPEALME ALVWSLHDRM GRADLRDDVS GVMFDYRP
|
|---|
| |