Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2579 |
Symbol | |
ID | 5085194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2619074 |
End bp | 2619646 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640484142 |
Product | hypothetical protein |
Protein accession | YP_001168772 |
Protein GI | 146278613 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00308857 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTCTACA AGGACGAACG GCTGGCGCTG TTCATCGACG GTTCGAACCT CTATGCCGCC GCCAAGGCGC TGGGTTTCGA CATAGATTAC AAGCTGCTGC GCCAGGAGTT CATGCGCCGC GGCAAGCTGC TGCGGGCATT CTACTACACC GCACTTCTCG AGAACGACGA TTACTCGCCC ATCCGGCCGC TGGTGGACTG GCTGCACTAC AACGGCTTCA CCATGGTGAC GAAACCGGCC AAGGAATACA CGGACAGCCA GGGGCGACGC AAGGTCAAGG GCAACATGGA CATCGAGCTT ACGGTCGATG CCATGGAACT CGCGCCGCGC GTGGACCACA TCGTGCTCTT CTCGGGCGAC GGCGATTTCC GGCCGCTGGT CGAGAGCCTG CAGCGGCAGG GCGTGCGCGT TTCGGTGGTC TCGACCATCC GCAGCCAGCC GCCGATGATC GCCGACGAGT TGCGCCGTCA GGCCGACAAT TTCATCGAAC TGGACGAGCT GCGCGAGGTG ATCGGCCGCC CCCCGCGAGA GCCGCGGATA GAGCGTGAAG AGATCGCCGT CGAAGCCAAG TGA
|
Protein sequence | MFYKDERLAL FIDGSNLYAA AKALGFDIDY KLLRQEFMRR GKLLRAFYYT ALLENDDYSP IRPLVDWLHY NGFTMVTKPA KEYTDSQGRR KVKGNMDIEL TVDAMELAPR VDHIVLFSGD GDFRPLVESL QRQGVRVSVV STIRSQPPMI ADELRRQADN FIELDELREV IGRPPREPRI EREEIAVEAK
|
| |