| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2411 |
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| Symbol | |
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| ID | 5083643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2457659 |
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| End bp | 2458636 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640483973 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001168604 |
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| Protein GI | 146278445 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.301146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.377072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAA CCCTGACCGC AGCCTTGCTG ACAAGCGTGG CGCTTGCCGC GCCGGCCTTC
GCCGAATGCG AGGTGACGCT GCGTTCCTCG GACACCCATC CCGACGGCTA TCCGACCGTC
GAGGGCGTCA AGCACATGGC CGAGCGCGCG AAAGAACTGT CGGACGGCCG GATCTGCATC
GAGGTCTTCC CCTCGTCGCA GCTGGGCGAG GAAAAGGACA CGATCGAGCA GACCCAGTTC
GGCGTGATCG ACATGGTGCG CGCCTCGTTC GGCTCGTTCA ACGACATCGT GCCCGAGGCG
CAGCTGCTGT CGCTGCCCTA CCTGTTCCGC TCCGAGGATC ACCTCCATAA CGTGATGGAC
GGCCCGATCG GCGACGATCT CGCCAAGGCT TTCGAGGCCA GGGACCTGAT CGCGGTGGCC
TATTACGACG GCGGCGCGCG CAGCTTCTAC AACAGCCAGA AGCCGATTGC CTCGATCGAC
GACCTGAAGG GCATGAAGTT CCGCGTCATG CAGTCGGATG TCTTCGTGGA CATGATGTCG
GCGCTGGGCG CCAACGCCAC GCCCATGCCC TACGGCGAGG TCTATTCCTC GATCCAGACC
GGCGTGATCG ACGGGGCCGA AAACAACTGG CCGTCCTACG ACAGCTCGGG TCACTTCGAG
GTGGCGAAAT ACTACACGCT CGACCAGCAC CTGATGGTGC CGGAACTGGT CGCGATCTCG
AAGACCAGAT GGGACGCGCT GTCGCCCGAG GATCAGCAGA TCCTGCGCCA GGCCGCCGAG
GAATCCGAGC CGGTGCAGCG CAAGCTCTGG GCCGAGCAGG AGAAGGCGTC GGAAGAGAAG
GTGCTGGCCG CCGGGTCCGA GGTGATCCGC GACATCGACA AGACCCCCTT CATCGAGGCG
ATGGCGCCGG TCTATGAAAA GTATGTCACG AAGCCGGAAT ACCGGGATCT CGTGAAGCGC
ATTCAGGAAA CCGAGTGA
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| Protein sequence | MTRTLTAALL TSVALAAPAF AECEVTLRSS DTHPDGYPTV EGVKHMAERA KELSDGRICI
EVFPSSQLGE EKDTIEQTQF GVIDMVRASF GSFNDIVPEA QLLSLPYLFR SEDHLHNVMD
GPIGDDLAKA FEARDLIAVA YYDGGARSFY NSQKPIASID DLKGMKFRVM QSDVFVDMMS
ALGANATPMP YGEVYSSIQT GVIDGAENNW PSYDSSGHFE VAKYYTLDQH LMVPELVAIS
KTRWDALSPE DQQILRQAAE ESEPVQRKLW AEQEKASEEK VLAAGSEVIR DIDKTPFIEA
MAPVYEKYVT KPEYRDLVKR IQETE
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