| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2396 |
|---|
| Symbol | |
|---|
| ID | 5083629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2445650 |
|---|
| End bp | 2446099 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640483959 |
|---|
| Product | cytochrome c, class II |
|---|
| Protein accession | YP_001168590 |
|---|
| Protein GI | 146278431 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3909] Cytochrome c556 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00865436 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.433653 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGAG TTCTTCTGTC CACCCTGGTG GCCGCCCTTC CCGCCGTCGC GATGGCCGCC
GATGCCGAGC GTGTCGTCGA AGCCCGCAAG GGCTTCTTCT CGCTCGTGGC GCTCGAGTTC
GGCCCGCTGG CCGCGATGGC GAAGGGCGAG ATGCCCTATG ACGCCGACGC CGCCAAGGCC
CATGCCGCCG ACCTCGTGGC GCTGACCAAA TACAATCCCT CCGACCTCTA TGCCCCCGGC
ACCTCGGCCG ACGATGTGAA GGGCACGGGC GCCAAGGCCG CGATCTGGCA GGACATGGAC
GCCTACCAGA AGAAGGGCAT GGCCTTCTTC GAAGCCGTGG CCGCGCTCGA GCCCGTCGCG
GGCAACGGCC AGAAGGAGCT TGGCGCCGCG GTGAACAAGG TGGGCGCCAC CTGCAAATCC
TGCCACGACG ACTTCCGCGC GAAGAACTGA
|
|---|
| Protein sequence | MRRVLLSTLV AALPAVAMAA DAERVVEARK GFFSLVALEF GPLAAMAKGE MPYDADAAKA
HAADLVALTK YNPSDLYAPG TSADDVKGTG AKAAIWQDMD AYQKKGMAFF EAVAALEPVA
GNGQKELGAA VNKVGATCKS CHDDFRAKN
|
|---|
| |