| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2340 |
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| Symbol | |
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| ID | 5084990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2386556 |
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| End bp | 2387149 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640483903 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001168534 |
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| Protein GI | 146278375 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00121404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATGC CGTTCGACGC CCTTTCCGAC GTCTCTGACG AGGCGTTGCT CGTGCTCTAC
GCCAACGGCG ACCCGGCGGC GGCGCGGGCG CTGACGCTGC GGCTGGCTCC TCGGGTGCTG
GCCGTGGCCA CGCGGATGCT GTCGGACCGG GCCGAGGCCG AGGATGTGAC GCAGGAGGCG
ATGCTCCGGC TCTGGCGCGT CGCGCCCGAC TGGCGGCAGG GCGAGGCGCG GGTCTCGACC
TGGCTCTACC GGGTGGTGTG CAACCTCTGC ACCGACCGGC TGCGCGGCCG TCGCCGGCGG
GCCTCGACGA CCCTCGATGA TGCACCCGAG CCGTGCGACG CCGCTCCGGG TGTCGAGGCG
GCCATGATCG AGGGCGATCG GATGCGGGCG CTCGACGCGG CGCTGGCGGC GCTGCCCGAA
CGCCAGCGGC AGGCGGTGGT GCTGCGCCAC CTCGAGGGGC TCTCGAATCC CGAGATCGCC
GAGGTGATGC AGGTCGGGGT CGAGGCGGTC GAGAGCCTGA CCGCGCGGGG CAAGCGGGCT
CTGGCGGCGC TGCTCGCGGG GCAGCGGGCC GAACTGGGTT ATGGAGAAGG CTGA
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| Protein sequence | MEMPFDALSD VSDEALLVLY ANGDPAAARA LTLRLAPRVL AVATRMLSDR AEAEDVTQEA
MLRLWRVAPD WRQGEARVST WLYRVVCNLC TDRLRGRRRR ASTTLDDAPE PCDAAPGVEA
AMIEGDRMRA LDAALAALPE RQRQAVVLRH LEGLSNPEIA EVMQVGVEAV ESLTARGKRA
LAALLAGQRA ELGYGEG
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