| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2310 |
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| Symbol | |
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| ID | 5084960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2352958 |
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| End bp | 2354604 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640483873 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001168504 |
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| Protein GI | 146278345 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.568209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATT ATGTGATCGT GGGTGCCGGC TCGGCCGGCT GTGCCATGGC CTACCGGCTG
GGCGAGGCGG GCCGTTCGGT GCTGGTCATC GAGCATGGGG GGACCGATGC CGGCCCCTTC
ATCCAGATGC CGGCGGCGCT CTCCTATCCG ATGAACATGG GGATCTACGA CTGGGGCCTG
AAGACCGAAC CCGAGCCGCA TCTGGGCGGG CGGGTGCTGG CCACGCCGCG CGGCAAGGTG
ATCGGGGGCT CGTCCTCGAT CAACGGGATG GTCTATGTCC GCGGCCATGC GCGCGACTTC
GACCACTGGG CCGAGGCGGG GGCGGCGGGC TGGGGCTTTG CCGAAGTGCT GCCCTATTTC
AAGCGGATGG AAAACTGGCA CGTTCCGGGC GACGTGGACT GGCGCGGCCA TGACGGGCCG
CTGCATGTGA CGCGGGGGCC ACGTTCGAAC CCGCTGTTCA ACGCCTTCAT CGAGGCGGGC
CGGCAGGCCG GCTATCCGGT CACCGACGAC TACAACGGCG CCGCGCAGGA GGGCTTCGGC
CCGATGGAGG CCACGATCTG GCAGGGCCGG CGCTGGTCGG CGGCCAACGC CTATCTCAAG
CCCGCCATGA AGCGGTTCGG CGTCAAGGTC ACGCGCGCGC TCGCGCTGCG GGTGGTGATC
GAGGAGGGCC GGGCGGTCGG CGTCGAGGTG CAGCGCCGCG GGCGGCGCGA GGTGATCCGG
GCGGGTCGCG AGGTGATCCT CGCCGCCTCC TCGATCAACA CGCCGAAGCT GCTGATGCTG
TCGGGCATCG GGCCGGCCGC GCATCTGGCC GAGCATGGGC TGCCCGTGGT GGCCGATCGG
CCGGGCGTGG GCCGGAACCT CCAGGATCAT CTGGAGGTCT ACATGCAATA CGCAAGCCTC
CTGCCGGTCA CGCTCTTCAA GCACTGGAAC CTGCGCGGCA AGGTGATGGT CGGCGCGCAG
TGGCTGTTTA CGGGGCGCGG CCTTGGCGCC TCGAACCAGT TCGAGGCCTG CGCCTTCATC
CGCTCCAGGC CCGGGGTGGA TTATCCCGAC ATCCAGTATC ACTTCCTGCC GATCGCCGTG
CGCTATGACG GCAAGGCCGC GGCCGAGGGG CACGGTTTTC AGGTCCATGT CGGACCGATG
CGCTCGCCCT CGCGCGGGTC GGTCACGCTG CGGTCGGCCG ATCCCGAGGC CGCCCCGGTA
ATCCGCTTCA ACTACATGTC CACGCCCGAG GACTGGGAGG ACTTCCGCCG CTGCATCCGC
CTCACGCGCG AGATCTTCGG GCAGGAGGCC TTCCGCCCCT TCGTGAAGGG CGAGATCCAA
CCCGGGCCGG CCTGCCAGTC CGATGACGAG ATCGACGCCT TCATCCGCGA GCATGTCGAG
AGCGCCTACC ACCCGTGCGG CACGGCGCGG ATGGGGCGGG CGGACGATCC GATGGCGGTG
GTCGATCCCG AATGCCGGGT GATCGGCGTG GCGGGGCTGC GCGTGGCCGA CAGTTCGATC
TTCCCGCGGG TGACGAACGG AAACCTGAAC GCCCCCTCGA TGATGGTGGG CGAGAAGGCG
GCGGACCATG TGCTCGGCCG GACGCCGCTG GCGCCCTTGA ACCACGAGCC CGTGGTGAAC
CCGAACTGGC GCGTGGCGCA GCGGTGA
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| Protein sequence | MFDYVIVGAG SAGCAMAYRL GEAGRSVLVI EHGGTDAGPF IQMPAALSYP MNMGIYDWGL
KTEPEPHLGG RVLATPRGKV IGGSSSINGM VYVRGHARDF DHWAEAGAAG WGFAEVLPYF
KRMENWHVPG DVDWRGHDGP LHVTRGPRSN PLFNAFIEAG RQAGYPVTDD YNGAAQEGFG
PMEATIWQGR RWSAANAYLK PAMKRFGVKV TRALALRVVI EEGRAVGVEV QRRGRREVIR
AGREVILAAS SINTPKLLML SGIGPAAHLA EHGLPVVADR PGVGRNLQDH LEVYMQYASL
LPVTLFKHWN LRGKVMVGAQ WLFTGRGLGA SNQFEACAFI RSRPGVDYPD IQYHFLPIAV
RYDGKAAAEG HGFQVHVGPM RSPSRGSVTL RSADPEAAPV IRFNYMSTPE DWEDFRRCIR
LTREIFGQEA FRPFVKGEIQ PGPACQSDDE IDAFIREHVE SAYHPCGTAR MGRADDPMAV
VDPECRVIGV AGLRVADSSI FPRVTNGNLN APSMMVGEKA ADHVLGRTPL APLNHEPVVN
PNWRVAQR
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