Gene Rsph17025_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2309 
Symbol 
ID5084959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2352211 
End bp2352855 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content71% 
IMG OID640483872 
Productnuclease 
Protein accessionYP_001168503 
Protein GI146278344 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGAC TTTGTTCGCT TCTCGTTCTG CTCGCCCTGA TGCCGTCCGC CGGGGCCGCT 
GCGGCCCTCG AGGGGCACGC GCGCGTCATC GACGGGGACA CGCTGGAAAT CGAGGGCGTC
CGCGTGCGCC TGTTCGGAAT CGACGCGCCC GAGCGCAACC AGACCTGCGG CGAGCGCGAT
CTCCTGTGGT CCTGCGGGGA ATGGGCGACC GAGCGGCTCG AGCTGTTGCT GGGCGGCGGG
CAGGTCCGCT GCACCGGGGC CGAACGCGAT CGCTACGGGC GGCTTCTCGC CACCTGCGAG
GTGGATGGGC AGGATGTCGG CGCGCGCATG GTGCGGTCGG GTGCGGCGCT CGCCTACCGG
CGCTATTCCA TGCGCTATGT CGGCGAGGAG GGGCGGGCGC AGGCGGAGGG GACGGGCGTC
TGGTCCGGGC CGATGCAGCG CCCCGAGGAT TATCGCCACA GTCCGCCGGC GCCGCCTCCG
CCGGGCGAGT GCGCGATCAA GGGCAATGTC TCGAAGAACG GCCGGATCTA CCATCTGCCG
GGGCAGGCGG ATTACGATCG CACCGTCATA TCCGGCCCCG AGGAGCGGTG GTTCTGCAGC
GCGCGCGAGG CCGAGTCGGC GGGCTTTCGC CCGGCGCGCC GCTGA
 
Protein sequence
MLRLCSLLVL LALMPSAGAA AALEGHARVI DGDTLEIEGV RVRLFGIDAP ERNQTCGERD 
LLWSCGEWAT ERLELLLGGG QVRCTGAERD RYGRLLATCE VDGQDVGARM VRSGAALAYR
RYSMRYVGEE GRAQAEGTGV WSGPMQRPED YRHSPPAPPP PGECAIKGNV SKNGRIYHLP
GQADYDRTVI SGPEERWFCS AREAESAGFR PARR