Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2300 |
Symbol | |
ID | 5083719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2340533 |
End bp | 2342662 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640483863 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_001168494 |
Protein GI | 146278335 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAA ATCTGGATGC GTGGCGCAAG CTCGCCGAGA AGGAACTGAA GGGGAGAAAC CCCGACAGCC TGACCTGGAA CACGCTGGAG GGCATCCCGG TCAAGCCGCT CTACACGAAG GCCGATCTCG ACGGGATCGA CCATCTGGGC GGGCTGCCCG GCATCGCCCC CTTCACCCGC GGCGTGCGCG CGACGATGTA TGCCGGCCGG CCCTGGACCA TCCGCCAGTA TGCGGGCTTC TCGACCGCCG AGGCCTCGAA CGCCTTCTAC CGCAAGGCGC TTGCGGCCGG TCAGCAGGGC GTCTCGGTCG CCTTCGACCT CGCGACCCAC CGCGGCTATG ACAGCGACCA CCCTCGCGTG GTGGGCGACG TCGGCAAGGC GGGCGTGGCC ATCGACTCGG TCGAGGACAT GAAGATCCTC TTCGACGGCA TCCCGCTGGA AAAGATCAGC GTCTCCATGA CGATGAACGG CGCGGTGATC CCGGTGCTGG CGAACTTCAT CGTGACCGGC GAGGAGCAGG GCGTGCCGCG GGCCGAGCTT TCGGGGACGA TCCAGAACGA CATCCTCAAG GAGTTCATGG TCCGCAACAC CTACATCTAT CCGCCCGAGC CCTCGATGCG GATCATCGCG GACATCATCG AATACACCTC GAAGGAGATG CCGAAGTTCA ACTCGATCTC GATCTCCGGC TACCACATGC AGGAGGCGGG GGCGAACCTG GTGCAGGAGC TGGCCTATAC GCTGGCCGAC GGGCGCGAAT ATGTCCGGGC GGCGCTGGCC CGCGGCATGA ACGTGGACGA TTTCGCGGGG CGGCTTTCCT TCTTCTTCGC CATCGGCATG AACTTCTTCA TGGAGGCCGC GAAGCTGCGC GCCGCCCGGC TCCTCTGGCA CCGGATCATG TCCGAGTTCG AGCCGAAGAA GCCCGGCAGC CTGATGCTGC GCACCCACTG CCAGACCTCG GGTGTGTCGC TGCAGGAGCA GGATCCCTAC AACAACGTGA TCCGCACCGC CTATGAGGCG CTGGCCGCGG CGCTGGGGGG CACGCAGTCG CTGCACACCA ACGCGCTCGA TGAGGCGATC GCGCTGCCCA CTGAATTCTC GGCCCGGATC GCGCGCAACA CCCAACTCAT CCTGCAGGAG GAAACCGGCG TCACCAAGGT CGTCGATCCG CTGGCGGGCA GCTACTATGT CGAGAGCCTG ACCAACGAAC TGGCCGAGAA GGCCTGGGCG CTGATCGAGG AGGTCGAGGC GATGGGCGGC ATGACCAAGG CCGTGGCCTC GGGGATGCCC AAGCTGCGGA TCGAGGAATC CGCCGCTCGC CGGCAGGCCG CCATCGACCG CGGCGAGGAT GTGATCGTCG GCGTGAACAA GTATCGCCTC GCGAAGGAGG ATCCGATCGA GATCCTCGAC ATCGACAACG TCGCCGTTCG CGAAGCGCAG ATTGCACGGC TGGAGAAGAT GCGCGCCACC CGCGACGAGA CCGCCTGCCA GAAGGCTCTG GACGAACTCA CCCGCCGCGC GACCGAGGGC GGCAACCTGC TCGAAGCCGC CGTGGCCGCC TCGCGCGCCC GCGCCTCTGT CGGAGAGATC AGCATGGCCA TGGAGAAGGT GTTCGGCCGC CACCGCGCCG AGGTGAAGAC ACTCTCGGGC GTGTATGGCG CGGCCTACGA GGGCGATGAC GGATTCGCGC AGATCCAGCG CGACGTCGAG GCCTTCGCGG AAGAAGAGGG CCGCCGCCCG CGGATGCTGG TGGTCAAGAT GGGTCAGGAC GGCCACGACC GCGGCGCCAA GGTGATCGCC ACCGCCTTCG CCGACATCGG CTTCGATGTG GATGTGGGCA CTCTGTTCCA GACGCCGGAA GAGGCGGCGC AGGACGCCAT GGACAACGAC GTGCATGTGG TGGGCATCTC GTCGCTCGCC GCCGGTCACA AGACCCTGGC GCCGAAGCTG ATCGAGGCGC TGAAGGAAAA GGGCGCGGGC GACATCCTGG TGATCTGCGG CGGCGTGATC CCGCAACAGG ATTACGAGTT CCTGCACAAC GCGGGCGTCA AGGCGATCTT CGGGCCGGGA ACCAACATCC CCTCGGCCGC CAAGCACATC CTCGACCTGA TCCGCCAGGC GCGGACCTGA
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Protein sequence | MTENLDAWRK LAEKELKGRN PDSLTWNTLE GIPVKPLYTK ADLDGIDHLG GLPGIAPFTR GVRATMYAGR PWTIRQYAGF STAEASNAFY RKALAAGQQG VSVAFDLATH RGYDSDHPRV VGDVGKAGVA IDSVEDMKIL FDGIPLEKIS VSMTMNGAVI PVLANFIVTG EEQGVPRAEL SGTIQNDILK EFMVRNTYIY PPEPSMRIIA DIIEYTSKEM PKFNSISISG YHMQEAGANL VQELAYTLAD GREYVRAALA RGMNVDDFAG RLSFFFAIGM NFFMEAAKLR AARLLWHRIM SEFEPKKPGS LMLRTHCQTS GVSLQEQDPY NNVIRTAYEA LAAALGGTQS LHTNALDEAI ALPTEFSARI ARNTQLILQE ETGVTKVVDP LAGSYYVESL TNELAEKAWA LIEEVEAMGG MTKAVASGMP KLRIEESAAR RQAAIDRGED VIVGVNKYRL AKEDPIEILD IDNVAVREAQ IARLEKMRAT RDETACQKAL DELTRRATEG GNLLEAAVAA SRARASVGEI SMAMEKVFGR HRAEVKTLSG VYGAAYEGDD GFAQIQRDVE AFAEEEGRRP RMLVVKMGQD GHDRGAKVIA TAFADIGFDV DVGTLFQTPE EAAQDAMDND VHVVGISSLA AGHKTLAPKL IEALKEKGAG DILVICGGVI PQQDYEFLHN AGVKAIFGPG TNIPSAAKHI LDLIRQART
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