Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2269 |
Symbol | |
ID | 5083763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2307946 |
End bp | 2309118 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640483833 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001168464 |
Protein GI | 146278305 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0264196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.209917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTGG TGAAGCAGAG CCTGCTCGTT CTGGCCGTCG CGGCGGCGGT GCTGATCATC TGGGTGCTCT ATGTGCCGGC GGCGCGGCCG ATGCTGGCCC GCGCGGGCCT GCTCGAGCCG ATGGCGCGCC TCGGGATCGT GGCCGAGGAT GCCGAGGCGG CGGCCGCGCC CGGCCCGCGG GCCGCGGGCG GGGCACCGCT CACCCGCGTC ATCGCCCGTC CCGTCGAGGA GCGCTCGCTC AATGCCGTCG TCACCGCGGT GGGCAGCGCG CGGGCGGTGC GCGCCGCGAC CCTCGCCCCC GAGATCGAGG GCCGGATCGA TGCGCTCGGC GCGGAACCGG GAGGCCGCGT CGCGGCCGGC GCGCTCATCG CCTCGCTCGA CAGCGAGGCG GCGCGCATCG CGGTCAACCG GGCCGAACTG ATCCTCGCGG ACGCTCAAGA GGATCTCTCG CGCGCACAGC GTCTTGCCGG CTCGGGCGTC ACCAGCGATC TGGCCCGGCA GGAGGCGCTG CTCGCCGTGC GCACGGCCGA GCTTGAACTG CAGCAGGCCC GCTTCGATCT CTCGCAACAC CGGATCGTGG CCCCGTTCGA GGGCTGGGTC GGCATCCTCG AGCACGAGGT CGGCGATCAG ATCAGCCGGG GCGAGGTGCT GACCCGGCTC GACGACCGTT CGAGCCTGCT GGTGGACTTC CGCCTGCCCG AGCGGGTGGT GGGCAAGGTG GCGATCGGCG ATCTCGTGAC GGCGACGCCG CTGTCGGGGG CGCGCGATCC GCTCGAGGGC CGGATCAGCG CGCTCGACAA CCGGGTGGAC GAAGCCAGCC GGACCCTGCG CATCCGGGCC ACCATCCCCA ACGCGGACGA CCGGCTGCGG GCCGGCATGT CCTTTTCGAT CCGGCTCGAA CTGCCGGGAG AGCCGCGGCC GGCGGTCGAT CCTCTGGCGA TCCAGTGGGG CGCGGACGGG GCCTTCGTCT GGGTCGTCCG CGAGGGCGTT TCCCAGAAGG TTCCGGTGCG CATCCTGCAA CGCGATGCCG ATGCGGTGCT GATCCAGGCC GCGCTGCGTC CCGACGACCT CGTGGTGATC GAGGGCGTCC AGACCCTGCG CCCCGGCGGG CCGGTCGAGC TGGTCGAGCA GTCGGGCGCC CTCGCCGCCG CCTCGGCCGG ATCGAAGAGC TGA
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Protein sequence | MSLVKQSLLV LAVAAAVLII WVLYVPAARP MLARAGLLEP MARLGIVAED AEAAAAPGPR AAGGAPLTRV IARPVEERSL NAVVTAVGSA RAVRAATLAP EIEGRIDALG AEPGGRVAAG ALIASLDSEA ARIAVNRAEL ILADAQEDLS RAQRLAGSGV TSDLARQEAL LAVRTAELEL QQARFDLSQH RIVAPFEGWV GILEHEVGDQ ISRGEVLTRL DDRSSLLVDF RLPERVVGKV AIGDLVTATP LSGARDPLEG RISALDNRVD EASRTLRIRA TIPNADDRLR AGMSFSIRLE LPGEPRPAVD PLAIQWGADG AFVWVVREGV SQKVPVRILQ RDADAVLIQA ALRPDDLVVI EGVQTLRPGG PVELVEQSGA LAAASAGSKS
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