Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2256 |
Symbol | |
ID | 5083750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2291469 |
End bp | 2292992 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640483820 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001168451 |
Protein GI | 146278292 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0484017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.408162 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCATG CCCTGAAACA GCCCGTGGAA CACCGCGGGC TGATCACCCT GGTGATCATG CTCGCCACGA TCATGCAGGT GCTCGACACG ACGATCGCGA ATGTGGCGCT GCCCTCGATG ACGGGGGACC TCGACGCCTC GGCCGATACG ATCAACTGGG TGCTCACCTC CTACATCGTC GCCGCGGCGA TCATGACGCC CGTCACCGGC TGGCTCGCCG ACCGCATCGG CAAGCGCGAG CTGTTCCTCG TCTCGATCGT GGGCTTCACG CTGGCCTCGA TGGCCTGCGG CCTGGCCTGG AGCCTGCCCT CGATGGTGGG CTTCCGCCTG TTGCAGGGCG TGTTCGGCGC GGCCATCGTG CCCTTGTCGC AGACGTTCCT CCTCGACATC AACCCGCGCG AGAAGGCGGG GCAGGCGATG GCGCTCTGGG GCGCGGGGAT CATGGTGGGG CCGATCATCG GGCCCACACT CGGCGGCTGG CTGACCGAGA GCTGGGACTG GCGCTGGGTC TTCTTCATCA ACCTGCCCGT GGGGATCGTG GCCTTTCTCG GCTGCGCCGC CTGGCTGCCG AGGGCCGAGC GGGTCGTGCG CCGTTTCGAC TTCTTCGGCT TTGCCATGCT TGCCATTGCG CTCGGCGCAC TGCAGCTCAT GCTCGACCGG GGGGCCGAGG TGGAGTGGTT CGCCGCCCTC GAGATCTGGA TCTACCTGTT CCTGATGATC ACCGGCTTCT GGATCTTCGT GATCCACATT CTCGGCGCCG AGAAACCCTT CCTCGAGCCC GCGATGTTCG CCGACCGCAA CTTCGCCACC GGCCTCGTCT TCATCTTCGT GGTGGGAATC ATCCTGCTGG CAAGCCTCGC GCTCCTGCCG CCGATGCTGT CGCACATCTT CGGTTATCCG GTGATCACCA CGGGGCTCGT GATGGCCCCG CGCGGAGTGG GCACGATGAT CTCCATGCTG ATCGCAGGGC GTGTGCTGCG CCATGTCGAT GCGCGGCTGA TGGTGACGGC GGGTCTCGCG CTCACGGCCC TCTCGCTGCA CATGATGACG GGCTTCAGCC CGCAGATGGA CAGCACGCCC ATCATCCTGT CGGGCGTCGT GCAGGGGCTG GGCCTCGGCC TCGTCTTCGT GCCGCTCTCG ACCGTGGCCT TCGCCACCAT CGCGCCCCGT TTCCGGGCGG ACGCCACGAG CCTCTTCAGC CTCGTGCGCA ACATCGGCTC GTCGGTGGGG ATCTCGATGG TGACGGTGAT GCTGACCCAC AACAGCCAGA TCAACCACGC CGAGCTGGGC GCGCATGTCT CGCCCTACAA CCCGCAGCTC TGGCAGATCT CGCCCGAGGC GGCTCAGGGG GCGCTGCAGC CGCTGGCGGT GATGGACCAG CTCGTGACGC AGCAGGCGAC GATGATCGGC TATGTCGACG ACTTCCGCCT GATGATGCTG ATCACGCTCG CGGCGCTTCC GCTCGCGCTT CTGTTGCGAA AGCCGCAGGC GGGTGGGGCG CCGGTGACGG CGCATGCGGA CTGA
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Protein sequence | MTHALKQPVE HRGLITLVIM LATIMQVLDT TIANVALPSM TGDLDASADT INWVLTSYIV AAAIMTPVTG WLADRIGKRE LFLVSIVGFT LASMACGLAW SLPSMVGFRL LQGVFGAAIV PLSQTFLLDI NPREKAGQAM ALWGAGIMVG PIIGPTLGGW LTESWDWRWV FFINLPVGIV AFLGCAAWLP RAERVVRRFD FFGFAMLAIA LGALQLMLDR GAEVEWFAAL EIWIYLFLMI TGFWIFVIHI LGAEKPFLEP AMFADRNFAT GLVFIFVVGI ILLASLALLP PMLSHIFGYP VITTGLVMAP RGVGTMISML IAGRVLRHVD ARLMVTAGLA LTALSLHMMT GFSPQMDSTP IILSGVVQGL GLGLVFVPLS TVAFATIAPR FRADATSLFS LVRNIGSSVG ISMVTVMLTH NSQINHAELG AHVSPYNPQL WQISPEAAQG ALQPLAVMDQ LVTQQATMIG YVDDFRLMML ITLAALPLAL LLRKPQAGGA PVTAHAD
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