Gene Rsph17025_2256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2256 
Symbol 
ID5083750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2291469 
End bp2292992 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content67% 
IMG OID640483820 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001168451 
Protein GI146278292 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0484017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.408162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATG CCCTGAAACA GCCCGTGGAA CACCGCGGGC TGATCACCCT GGTGATCATG 
CTCGCCACGA TCATGCAGGT GCTCGACACG ACGATCGCGA ATGTGGCGCT GCCCTCGATG
ACGGGGGACC TCGACGCCTC GGCCGATACG ATCAACTGGG TGCTCACCTC CTACATCGTC
GCCGCGGCGA TCATGACGCC CGTCACCGGC TGGCTCGCCG ACCGCATCGG CAAGCGCGAG
CTGTTCCTCG TCTCGATCGT GGGCTTCACG CTGGCCTCGA TGGCCTGCGG CCTGGCCTGG
AGCCTGCCCT CGATGGTGGG CTTCCGCCTG TTGCAGGGCG TGTTCGGCGC GGCCATCGTG
CCCTTGTCGC AGACGTTCCT CCTCGACATC AACCCGCGCG AGAAGGCGGG GCAGGCGATG
GCGCTCTGGG GCGCGGGGAT CATGGTGGGG CCGATCATCG GGCCCACACT CGGCGGCTGG
CTGACCGAGA GCTGGGACTG GCGCTGGGTC TTCTTCATCA ACCTGCCCGT GGGGATCGTG
GCCTTTCTCG GCTGCGCCGC CTGGCTGCCG AGGGCCGAGC GGGTCGTGCG CCGTTTCGAC
TTCTTCGGCT TTGCCATGCT TGCCATTGCG CTCGGCGCAC TGCAGCTCAT GCTCGACCGG
GGGGCCGAGG TGGAGTGGTT CGCCGCCCTC GAGATCTGGA TCTACCTGTT CCTGATGATC
ACCGGCTTCT GGATCTTCGT GATCCACATT CTCGGCGCCG AGAAACCCTT CCTCGAGCCC
GCGATGTTCG CCGACCGCAA CTTCGCCACC GGCCTCGTCT TCATCTTCGT GGTGGGAATC
ATCCTGCTGG CAAGCCTCGC GCTCCTGCCG CCGATGCTGT CGCACATCTT CGGTTATCCG
GTGATCACCA CGGGGCTCGT GATGGCCCCG CGCGGAGTGG GCACGATGAT CTCCATGCTG
ATCGCAGGGC GTGTGCTGCG CCATGTCGAT GCGCGGCTGA TGGTGACGGC GGGTCTCGCG
CTCACGGCCC TCTCGCTGCA CATGATGACG GGCTTCAGCC CGCAGATGGA CAGCACGCCC
ATCATCCTGT CGGGCGTCGT GCAGGGGCTG GGCCTCGGCC TCGTCTTCGT GCCGCTCTCG
ACCGTGGCCT TCGCCACCAT CGCGCCCCGT TTCCGGGCGG ACGCCACGAG CCTCTTCAGC
CTCGTGCGCA ACATCGGCTC GTCGGTGGGG ATCTCGATGG TGACGGTGAT GCTGACCCAC
AACAGCCAGA TCAACCACGC CGAGCTGGGC GCGCATGTCT CGCCCTACAA CCCGCAGCTC
TGGCAGATCT CGCCCGAGGC GGCTCAGGGG GCGCTGCAGC CGCTGGCGGT GATGGACCAG
CTCGTGACGC AGCAGGCGAC GATGATCGGC TATGTCGACG ACTTCCGCCT GATGATGCTG
ATCACGCTCG CGGCGCTTCC GCTCGCGCTT CTGTTGCGAA AGCCGCAGGC GGGTGGGGCG
CCGGTGACGG CGCATGCGGA CTGA
 
Protein sequence
MTHALKQPVE HRGLITLVIM LATIMQVLDT TIANVALPSM TGDLDASADT INWVLTSYIV 
AAAIMTPVTG WLADRIGKRE LFLVSIVGFT LASMACGLAW SLPSMVGFRL LQGVFGAAIV
PLSQTFLLDI NPREKAGQAM ALWGAGIMVG PIIGPTLGGW LTESWDWRWV FFINLPVGIV
AFLGCAAWLP RAERVVRRFD FFGFAMLAIA LGALQLMLDR GAEVEWFAAL EIWIYLFLMI
TGFWIFVIHI LGAEKPFLEP AMFADRNFAT GLVFIFVVGI ILLASLALLP PMLSHIFGYP
VITTGLVMAP RGVGTMISML IAGRVLRHVD ARLMVTAGLA LTALSLHMMT GFSPQMDSTP
IILSGVVQGL GLGLVFVPLS TVAFATIAPR FRADATSLFS LVRNIGSSVG ISMVTVMLTH
NSQINHAELG AHVSPYNPQL WQISPEAAQG ALQPLAVMDQ LVTQQATMIG YVDDFRLMML
ITLAALPLAL LLRKPQAGGA PVTAHAD