| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2251 |
|---|
| Symbol | |
|---|
| ID | 5083745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2287300 |
|---|
| End bp | 2288019 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640483815 |
|---|
| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
|---|
| Protein accession | YP_001168446 |
|---|
| Protein GI | 146278287 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.165492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.689326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTCT ATCCCGCCAT CGACCTCAAG GACGGCCAGT GCGTGCGCCT CTTGCGCGGC
GAGATGGAGG CGGCGACGGT CTTCGGCGAC GATCCGGCCG CCCAGGCGGC GGCCTTCGAG
GCCGCGGGCT GCGAATGGCT GCATCTCGTC GATCTGAACG GCGCCTTCGC GGGTCATCCG
GTGAATGGCG CCGCCGTCGA AGCGATTCTC GCCCGACTGA CGGTGCCCGC CCAGCTCGGC
GGCGGCATCC GTGACATGAA GACCATTGCC CTGTGGCTCG AGAAGGGTCT CGCGCGGGTG
ATCCTCGGAA CCGTCGCGGT CGAGAATCCG GCCCTCGTGC GCGAGGCCGC CCGCGCCTTC
CCCGGCCGGG TCGCGGTCGG CATCGACGCT CGCAAGGGCC GCGTCGCCAC CAAGGGCTGG
GCCACCGAGA CCGACGTGAT GGCCACCGAC CTCGCGCGCT CCTTCGAGGA TGCGGGCGTG
GCGGCCCTCA TCTACACCGA CATCGACCGC GACGGCGCCA TGGCCGGGCC CAACATCGAG
GCGACCGACG CGCTGGCCCG CGCGGTTTCG ATCCCGGTCA TCGCCTCGGG CGGTGTCTCC
TCGCTCGCCG ATCTGGTGGC GCTGCGCGAC ACCGGCCGCA TCGCGGGCGC GATCTCGGGC
CGCGCCCTCT ACGACGGCGC CCTCGATCTC GCCGAGGCGC TGCGGACGCT GCGCGCCTGA
|
|---|
| Protein sequence | MILYPAIDLK DGQCVRLLRG EMEAATVFGD DPAAQAAAFE AAGCEWLHLV DLNGAFAGHP
VNGAAVEAIL ARLTVPAQLG GGIRDMKTIA LWLEKGLARV ILGTVAVENP ALVREAARAF
PGRVAVGIDA RKGRVATKGW ATETDVMATD LARSFEDAGV AALIYTDIDR DGAMAGPNIE
ATDALARAVS IPVIASGGVS SLADLVALRD TGRIAGAISG RALYDGALDL AEALRTLRA
|
|---|
| |