Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2224 |
Symbol | |
ID | 5084723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2259564 |
End bp | 2260223 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640483788 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001168419 |
Protein GI | 146278260 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.719824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCTGT CGCTCAATCA CGGGCCGCGG CGCGATGGCG CCCGGCCCGA TCTCGTGGTG ATCCACTACA CGGCGATGTC GAGCGCCGAG GCGGCCTGCG CGCGTCTCTG TGATCCGGCG GCCGAGGTTT CGGCCCACTG GCTGATTTCC GAACCGGGAG AATGCCGGGC GCTTGTTCCC GAAGAGCGGC GGGCCTGGCA CGCAGGGGCG GGCGCATGGG GCGCGGTGAC GGATGTCAAC TCGCGCTCGA TCGGGATCGA GCTGGCCAAT CCGGGCGATC GGCCGTTCCC CGAGCCGCAG ATGGCCGCGC TCGAGCGGCT TCTGGCGGGC ATCCTCGACC GCTGGTCGAT CCCGCCCGAG CGGGTGATCG CCCATTCCGA CATGGCGCCG GGGCGCAAGA TCGATCCAGG CCCGCGCTTC GACTGGCGCA GGCTTGCGCG TGCGGGGCTG TCGGTCTGGC CCGAGCCGCG CGCGCCCGGC GACTTTCGCG CCGCCGCCTT GGCCTTCGGC TATCCCGATC TGCCGGAGGA GCTGATCCTT GCCTCCTTCC GCCTCCGGTT CCGCCCCTGG GCCTGCGGAC CCCTGCAGGC CGAGGATGCG GCGCTCGCCG CCGATCTTGC GGCGCGCTTC CCGGTTGACG GGCGCGGGGC GGCGGCGTAA
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Protein sequence | MSLSLNHGPR RDGARPDLVV IHYTAMSSAE AACARLCDPA AEVSAHWLIS EPGECRALVP EERRAWHAGA GAWGAVTDVN SRSIGIELAN PGDRPFPEPQ MAALERLLAG ILDRWSIPPE RVIAHSDMAP GRKIDPGPRF DWRRLARAGL SVWPEPRAPG DFRAAALAFG YPDLPEELIL ASFRLRFRPW ACGPLQAEDA ALAADLAARF PVDGRGAAA
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