Gene Rsph17025_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2224 
Symbol 
ID5084723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2259564 
End bp2260223 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content73% 
IMG OID640483788 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001168419 
Protein GI146278260 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.719824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCTGT CGCTCAATCA CGGGCCGCGG CGCGATGGCG CCCGGCCCGA TCTCGTGGTG 
ATCCACTACA CGGCGATGTC GAGCGCCGAG GCGGCCTGCG CGCGTCTCTG TGATCCGGCG
GCCGAGGTTT CGGCCCACTG GCTGATTTCC GAACCGGGAG AATGCCGGGC GCTTGTTCCC
GAAGAGCGGC GGGCCTGGCA CGCAGGGGCG GGCGCATGGG GCGCGGTGAC GGATGTCAAC
TCGCGCTCGA TCGGGATCGA GCTGGCCAAT CCGGGCGATC GGCCGTTCCC CGAGCCGCAG
ATGGCCGCGC TCGAGCGGCT TCTGGCGGGC ATCCTCGACC GCTGGTCGAT CCCGCCCGAG
CGGGTGATCG CCCATTCCGA CATGGCGCCG GGGCGCAAGA TCGATCCAGG CCCGCGCTTC
GACTGGCGCA GGCTTGCGCG TGCGGGGCTG TCGGTCTGGC CCGAGCCGCG CGCGCCCGGC
GACTTTCGCG CCGCCGCCTT GGCCTTCGGC TATCCCGATC TGCCGGAGGA GCTGATCCTT
GCCTCCTTCC GCCTCCGGTT CCGCCCCTGG GCCTGCGGAC CCCTGCAGGC CGAGGATGCG
GCGCTCGCCG CCGATCTTGC GGCGCGCTTC CCGGTTGACG GGCGCGGGGC GGCGGCGTAA
 
Protein sequence
MSLSLNHGPR RDGARPDLVV IHYTAMSSAE AACARLCDPA AEVSAHWLIS EPGECRALVP 
EERRAWHAGA GAWGAVTDVN SRSIGIELAN PGDRPFPEPQ MAALERLLAG ILDRWSIPPE
RVIAHSDMAP GRKIDPGPRF DWRRLARAGL SVWPEPRAPG DFRAAALAFG YPDLPEELIL
ASFRLRFRPW ACGPLQAEDA ALAADLAARF PVDGRGAAA