Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2207 |
Symbol | |
ID | 5084111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2237960 |
End bp | 2240311 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640483770 |
Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
Protein accession | YP_001168402 |
Protein GI | 146278243 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.177783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTTC GACCCGCAGG ACAGGAGCAC CCGATCGTGC CATCTTTTTC GACCACTCTC GAGCAAGCCA TCCACGGCGC TCTGGCGCTT GCGAATGCCC GCCGTCATGA ACTCGCCACG CTGGAGCATC TGCTTCTGGC GCTGATCGAC GAGCCCGACG CCTCGCGCGT GATGAAGGCC TGTTCGGTCG ATCTTGACGA ATTGCGCAAG ACGCTTGTCG ATTTCATCGA CGACGACCTG TCCACCCTCG TCACCACCGT CGAAGGGTCC GAGGCCGTGC CCACGGCCGC CTTCCAGCGC GTGATCCAGC GCGCCGCCAT CCATGTGCAG TCCTCCGGCC GGACCGAGGT GACGGGCGCC AATGTGCTGG TCGCCATCTT CGCCGAACGG GAGTCGAACG CCGCCTATTT CCTGCAGGAG CAGGACATGA CCCGCTACGA CGCGGTCAAC TTCATCGCGC ATGGCGTGGC GAAGGACCCG TCCTATGGCG AGCCCCGCCC CGTCAGCGGC GCGGAGGAGC ATCATGAGAC CCCGAAGGCT GAAGCTGGCG AAGCGAAGGA GTCTGCGTTG TCCAAATATT GCGTTGACCT GAACGTCAAG GCCCGCAAGG GCGACGTGGA CCCGCTGATC GGCCGCGAGC TTGAGGTCGA ACGCTGCATC CAGGTGCTCT GCCGCCGCCG GAAGAACAAC CCGCTGCTGG TGGGCGATCC GGGCGTCGGC AAGACCGCCA TCGCCGAGGG CCTCGCGCGC AAGATCGTCA ACGGCGAGAC GCCTGACATC CTCGCCCGCG CCACGATCTT CTCGCTCGAC ATGGGCGCGC TGCTGGCCGG CACCCGCTAC CGCGGCGACT TCGAGGAGCG GCTGAAGGCC GTGGTCAAGG AGATGGAGGA TCATCCCGAC GCCATCCTCT TCATCGACGA GATCCACACC GTGATCGGCG CCGGCGCCAC CTCCGGCGGG GCGATGGACG CATCGAACCT GCTCAAGCCC GCGCTGCAGG GCGGCAAGCT GCGCTGCATG GGCTCGACCA CCTACAAGGA GTATCGCCAG CACTTCGAGA AGGACCGTGC GCTGTCGCGG CGCTTCCAGA AGATCGACGT GAACGAGCCC TCGGTCGAAG ATACGGTGAA GATCCTGATG GGTCTGAAAC CCTATTTCGA AGAGCATCAC GACCTGCGCT ACACGCAGGA TGCGATCCGC TCGGCGGTGG AACTCTCGGC GCGCTACATC CATGACCGCA AGCTGCCCGA CAAGGCGATC GACGTGATCG ACGAGGCGGG CGCGGCCCAG CATCTGCTGG CCGACAGCAA GCGCCGCAAG ACCATCGGTC CGCGCGAGAT TGAAGCCGTG GTGGCCAAGA TCGCCCGCAT CCCCCCGAAG AGCGTCTCGA AGGACGATGC CGAGGTGCTG CGCGATCTGG AAAAGACGCT CAAGCGGGTG GTCTTCGGGC AGGATAAGGC GATCGAGGCG CTGTCCTCGG CGATCAAGCT GGCCCGTGCC GGCCTGCGCG AGCCCGAGAA GCCGATCGGC AACTATCTCT TCGCCGGCCC CACCGGCGTC GGCAAGACCG AGGTCGCCAA GCAGCTCGCC TCGATTCTCG GCGTGGAACT GCTGCGCTTC GACATGTCGG AATATATGGA GAAGCACGCG GTCTCGCGCC TCATCGGCGC GCCTCCGGGC TATGTCGGCT TCGACCAGGG CGGGATGCTG ACCGATGGCG TGGACCAGCA TCCGCATTGC GTGCTGCTGC TCGACGAGAT CGAGAAGGCT CACCCGGATG TCTACAACAT CCTGCTGCAG GTGATGGACC ACGGCAAGCT CACCGACCAC AACGGCCGGT CGGTGGATTT CCGCAACGTG ATCCTGATCA TGACCTCGAA CGCCGGGGCG GCGGAACTGG CGAAGTCGGC CATCGGCTTC GGCCGCGACC GGCGCGAGGG CGAGGATACG GCCGCGATCG AGCGGACCTT CACGCCCGAG TTCCGTAACC GCCTCGACGC CGTCATCTCC TTCGCCCCGC TCGGCAAGGA GATCATCCTG CAGGTGGTCG AGAAGTTCGT CCTCCAGCTC GAGGCGCAGC TGATGGACCG CGGCGTTCAT ATCGAGCTGT CGCCGGAGGC CGCCGCCTGG CTGGGCGACA AGGGCTACGA CGACAAGATG GGCGCGCGAC CGCTGGGCCG CGTGATCCAG GAAAACATCA AGAAGCCGCT GGCCGAGGAA CTTCTGTTCG GCCGGCTGGT GAAGGGCGGG CTGGTCAAGG TGGGCGTCAA GGACGGCACG ATCGATCTCA GGATCGAAGA GCCGAAACCG CGCCTGACGG GCTCCAAGCC GCCGCTGCTG ACGGCGGACT GA
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Protein sequence | MPLRPAGQEH PIVPSFSTTL EQAIHGALAL ANARRHELAT LEHLLLALID EPDASRVMKA CSVDLDELRK TLVDFIDDDL STLVTTVEGS EAVPTAAFQR VIQRAAIHVQ SSGRTEVTGA NVLVAIFAER ESNAAYFLQE QDMTRYDAVN FIAHGVAKDP SYGEPRPVSG AEEHHETPKA EAGEAKESAL SKYCVDLNVK ARKGDVDPLI GRELEVERCI QVLCRRRKNN PLLVGDPGVG KTAIAEGLAR KIVNGETPDI LARATIFSLD MGALLAGTRY RGDFEERLKA VVKEMEDHPD AILFIDEIHT VIGAGATSGG AMDASNLLKP ALQGGKLRCM GSTTYKEYRQ HFEKDRALSR RFQKIDVNEP SVEDTVKILM GLKPYFEEHH DLRYTQDAIR SAVELSARYI HDRKLPDKAI DVIDEAGAAQ HLLADSKRRK TIGPREIEAV VAKIARIPPK SVSKDDAEVL RDLEKTLKRV VFGQDKAIEA LSSAIKLARA GLREPEKPIG NYLFAGPTGV GKTEVAKQLA SILGVELLRF DMSEYMEKHA VSRLIGAPPG YVGFDQGGML TDGVDQHPHC VLLLDEIEKA HPDVYNILLQ VMDHGKLTDH NGRSVDFRNV ILIMTSNAGA AELAKSAIGF GRDRREGEDT AAIERTFTPE FRNRLDAVIS FAPLGKEIIL QVVEKFVLQL EAQLMDRGVH IELSPEAAAW LGDKGYDDKM GARPLGRVIQ ENIKKPLAEE LLFGRLVKGG LVKVGVKDGT IDLRIEEPKP RLTGSKPPLL TAD
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