Gene Rsph17025_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2161 
Symbol 
ID5084176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2192102 
End bp2193466 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content73% 
IMG OID640483724 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_001168356 
Protein GI146278197 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.905715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAGGG GTTTCACGGT GAAGCGGACG GCTGCGGTCA CGGGATTTGC GCTTCTTGGA 
CTGCTCGGCG CCTGCGGCGA GCGCGAACTG ATCCTTCCCG GCGAACGGTT CGACGTTCGC
GCGCCGCTCG ATGCGAGCGT GCCGACCGAG GGAAATCCGG CGCCTGCGGA CCGCAGCGGC
CTCAGCGCCA ACCGGTCGCT GCCCGTGGCG CTGCCGGCGG CCACGGCGAA CGCCTCCTGG
CCGCAGCGGG GGGGCAATGC GGCCCATCTC GCGCCGCATG CAAGCCTCTC GGCGGCCCCG
CAACTGGTCT GGAGCAGCGA CATCGGCGCG GGCAACAGCC GCCGCAACCG GATCTCGGCC
GCCCCGGTCG TGGCCGACGG GCGCGTCTTC ACCATGGACG CCATGAGCGA CGTGCAGGCC
ACCTCGACGG GCGGCGCGCA GCTCTGGCGG GTGGACATCA CGCCGCCCTC CGACCGGGCG
ACCGACCTCT CCGGCGGAGG GCTGGCCTAC GGCGCCGGAC GCCTCTTTGC GACCACGGGC
TTTGGCGAGC TGGTGGCGCT CGATCCCGCC ACGGGCGCGG TTCTCTGGCG CCAGAAGCTC
GGCGCTCCGG CCACCGGCGC CCCGATGGTC GAGGGCGAGA CGGTCTATGT CACCGGCCGC
GACAGCTCGG CCTGGGCGAT CGACGCCTCG AACGGGCGCG TCCGCTGGCA GCTTCCGGGT
GCGCCCTCCA GCACCGGCAT GATTGGCGGC TCGGCCCCGG CGATGGCGGG CGGAACGGTG
CTCTTCCCCT TCAACAGCGG CCAGATGATC GCCGTCCTGC GCGAGGGCGG ATCGCAACTC
TGGTCGTCGC AGGTGGCGGG CGAGCGGCTC GGGCGCGCCT ACACCGGCTT CCGCGACATC
ACCGGCGATC CGGTCGTTTC GGGCGGCACG ATCTACGTCG GCAGCTCGGC CGGCCGCACG
CTTGCGATGT CCGCGGCCTC GGGCGAGACG CTGTGGTCGG CCGACGAGGG CGCGCTTGCG
CCGGTGGCCG TGGCGGGCGG TTCGGTCTTC CTCGTCTCGG ACGAGGCGCG GCTCGTGCGG
CTCGACGCAG CGACCGGGTC GGTGATCTGG TCGGTGGACA TGCCCTACTG GGAAAATGCC
ACGCCCAAGC GGCGCAAGGG GATCACCGCC CATTACGGCC CCGTGCTGGC AGGGGGGCGC
CTCCTCGTGG CCTCGTCGGA CGGGCTGGTG CGCTTCTTCA ACCCGGCGGA CGGTGCCCTC
GTCGGCTCTG CCGAACTGCC GGGCGGTGCG GCGGCGCAGC CGGCGCTGGC AGGGGGAACG
CTCTATGTCG TCGCGGCCAA CGGGAAACTT CTCGCTTTCC GCTGA
 
Protein sequence
MKRGFTVKRT AAVTGFALLG LLGACGEREL ILPGERFDVR APLDASVPTE GNPAPADRSG 
LSANRSLPVA LPAATANASW PQRGGNAAHL APHASLSAAP QLVWSSDIGA GNSRRNRISA
APVVADGRVF TMDAMSDVQA TSTGGAQLWR VDITPPSDRA TDLSGGGLAY GAGRLFATTG
FGELVALDPA TGAVLWRQKL GAPATGAPMV EGETVYVTGR DSSAWAIDAS NGRVRWQLPG
APSSTGMIGG SAPAMAGGTV LFPFNSGQMI AVLREGGSQL WSSQVAGERL GRAYTGFRDI
TGDPVVSGGT IYVGSSAGRT LAMSAASGET LWSADEGALA PVAVAGGSVF LVSDEARLVR
LDAATGSVIW SVDMPYWENA TPKRRKGITA HYGPVLAGGR LLVASSDGLV RFFNPADGAL
VGSAELPGGA AAQPALAGGT LYVVAANGKL LAFR