Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2130 |
Symbol | |
ID | 5082909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2161300 |
End bp | 2161704 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640483693 |
Product | integrase catalytic subunit |
Protein accession | YP_001168326 |
Protein GI | 146278167 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.590347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGACG ATTTCAACCG TGAGGGCCTG GGGATCGAGG CCGACTTCTC GCTGCCCGCC GAGCGGGTTG TCCGGTCGCT GAACCAGATC ATCGAGTGGC GCGGCAAGCC CTTGGCGATC AGGGTCGACC ATGGCCCCGA ACATGTCAGT TCCACACTGA TGACCTGGGC CGAGAGGCAG GGCATCGCGC TGACCTACAT CCGGCCCGGC AAGCCGCAGC AGAACGCCTA TGTCGAGCGC TACAACCGGA CCGTCCGGCA CGAATGGCTG GACCTCTACA TCTTCGAAAC CATCGAGGAG GTGCAGCGGA CCGCCACCGA ATGGCTATGG ACCTATAACA ACGAACGCCC CAACATGGGC ATCGGCGGGG TCACACCCGC CATGAAGCTG AAAATGGCCG CATAA
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Protein sequence | MLDDFNREGL GIEADFSLPA ERVVRSLNQI IEWRGKPLAI RVDHGPEHVS STLMTWAERQ GIALTYIRPG KPQQNAYVER YNRTVRHEWL DLYIFETIEE VQRTATEWLW TYNNERPNMG IGGVTPAMKL KMAA
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