| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2024 |
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| Symbol | |
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| ID | 5082638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2067150 |
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| End bp | 2068547 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640483586 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001168220 |
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| Protein GI | 146278061 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAGA TCAGATTGTG GGCAGCGGCG ACCTGCTCGG CTCTGGCGGT GATGGCGTCC
GCGGCCCAGG CGGAAACGCT GGCCGATGCC CTCATCTCCG CCTACCGCAA CAGCAACCTG
CTCGAGCAGA ACCGGGCGCT CCTGCGGGCC ACGGACGAGG ATGTGGCCAT CGCGGTCGCG
GCCCTGCGTC CGGTCGTGCA GTTCGTGGCG GAATCGACCT ACAGTTTTCA GCGTGTGAGG
GATAACCCCC CTCTGGGAGG ACCCGCGCAG CGCTTCAATG TCGAGGATCT CAACTCGTCG
ATCGCGCTGA CGGCCTCGAT GACGCTCTAT GATTTCGGCC GCAACGCACT GGCGGTCGAG
GCCGCGAAGG AATCCGTGCT CGCCACGCGC GAGGCGCTGC TGCAGGTCGA GCAGAACGTG
CTTCTCGATG CGGTGGATGC CTATGTCCGC GTGCAGCTGG CGCAGTCCAT CGTGAACCTC
CGCCGCAACA ACCTCGGCCT GATCGAACAG GAACTCCAGG CCGCGGAGGA TCGGTTCGAG
GTGGGCGAGG TGACGCGCAC GGACGTGTCG CAGGCGCAGG CGGCCCTTGC CGCCTCGCGC
TCGGACCTGA CGTCGGCCGA GGGCGATCTC GTCGTTGCGC GCGAAGCCTA CAAGGCGGCG
GTGGGGCGGT ATCCGGGCGA TCTCGCCCCG CGTCCGACGC CGCCGCGCAC GGCCGCCTCT
GTCGAGGCCG CGCGTCAGGT GGCGCTGCGC ACCCATCCGC AAGTCCGGCA GGCCCAGCGT
CAGGTGGCCG CCGCGGATCT CAACGTGGCG CGTGCCAAGG CTGCGATGAA GCCCACCATC
AATGGCGAGG CGCGGGTGGG CCTCAACGAC GAAGGCCGCG AGTCGGCGGC CGTCGGTCTT
GCCCTTCGCC ACACGCTTTA TGCCGGGGGC GAGTTGTCGG CGCTCTTCCG TCAGTCTCTT
GCCAACCGCG ATGCGCAGAA GGCGAATCTC CTGCAGGTCG GTGTGAACAT TGCGCAGAAC
GTGGGCAACG CCTGGTCGAC CGTGCAGGTC GCCACTGCCG CCATCGCGGC CGGGGACGAG
GAAGTGCGCG CCGCCCGGAC CGCCTTCGAG GGCGTGCGCG AAGAGGCGAC CCTGGGTGCG
CGGACGACGC TCGACGTGCT GAACGCCGAG CAGGACCTGC TGGATGCGCA GGCCGACCGG
CTCACGGCCG AGGCGCAGCG CTATGTCGGC ATCTACCAGG TGCTCGCCTC GATGGGCCTG
CTGACGGTCG AACACCTGAA CCTCGGCATC CCGACCTATG ACCCGGCGGC CTATTACAAC
GCCGTCAAGA ACGCTCCCGC GACCAGCGCG CAGGGCAAGC GGCTCGACCG CGTGCTTCAG
TCGATCGGCC GGAACTGA
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| Protein sequence | MRKIRLWAAA TCSALAVMAS AAQAETLADA LISAYRNSNL LEQNRALLRA TDEDVAIAVA
ALRPVVQFVA ESTYSFQRVR DNPPLGGPAQ RFNVEDLNSS IALTASMTLY DFGRNALAVE
AAKESVLATR EALLQVEQNV LLDAVDAYVR VQLAQSIVNL RRNNLGLIEQ ELQAAEDRFE
VGEVTRTDVS QAQAALAASR SDLTSAEGDL VVAREAYKAA VGRYPGDLAP RPTPPRTAAS
VEAARQVALR THPQVRQAQR QVAAADLNVA RAKAAMKPTI NGEARVGLND EGRESAAVGL
ALRHTLYAGG ELSALFRQSL ANRDAQKANL LQVGVNIAQN VGNAWSTVQV ATAAIAAGDE
EVRAARTAFE GVREEATLGA RTTLDVLNAE QDLLDAQADR LTAEAQRYVG IYQVLASMGL
LTVEHLNLGI PTYDPAAYYN AVKNAPATSA QGKRLDRVLQ SIGRN
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