| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1945 |
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| Symbol | |
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| ID | 5082420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1984938 |
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| End bp | 1986740 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640483507 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001168141 |
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| Protein GI | 146277982 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.188003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGC TTAAGAGGGG TCTCGCTGCG ACCCTGCTGC TCTCGTCTGC GCCGGTCTAT
GCGAACGACT CGGTCATGCA GGCGATTGGG GATTCGACCC AATGGGCGAT CCAGACCGGC
GACTACGCCA ACACCCGCTA CTCCGAGCTG GACCAGATCA ACCGCGAGAA CGTGGGCAAG
CTTCAGGTCG CCTGGACCTT CTCGACGGGC GTGCTGCGCG GCCACGAGGG CTCGCCGCTC
GTGATTGACG GGATCATGTA TGTCCACACC CCGTTTCCCA ACAATGTCTA TGCGCTCGAC
CTGAACAACG AGGGCAGGAT CCTGTGGCGC TACGAGCCGC AGCAGAACCC CGACGTCGTG
GGCGTGATGT GCTGCGACAC GGTCAACCGC GGCGTGGCCT ATGCCGATGG AATGATCTTC
CTGCACCAGG CCGACACCAC CATCGTCGCG CTGGACGCCA AGTCCGGCGA GGTGAAATGG
AGCGTCGTCA ACGGTGATCC CACCAAGGGC GAGACCAACA CGGCAACCGT CCTTCCGGTC
AAGGACAAGA TCCTCGTCGG CATCTCGGGG GGCGAGTTCG GTGTCCGCGG CCACCTGACC
GCCTACGACA TGCAGACCGG CGAGCAGGTC TGGCGCGCCT TCTCGACCGG CCCGGACGAG
GAGATGCTCG TCGATCCCGA GCAGACCACG CATCTCGGAA AGCCGATCGG CCCGAACTCG
TCGCTGGAAA GCTGGGAAGG CGATCAGTGG CAGATCGGCG GCGGCACCAC CTGGGGCTGG
TATTCCTACG ATCCGGACCT GAACCTTGTC TATTACGGCA CCGGCAACCC CTCGACCTGG
AACCCGTCGC AGCGGCCGGG CGACAACAAG TGGTCGATGA CCATCATGGC GCGCGATGTC
GATACCGGCA TGGCGAAGTG GTTCTACCAG AAGACCCCGC ACGACGAGTG GGACTATGAC
GGGGTGAACG AGAACATCCT CGTCGATCAG GAGATCGACG GGCAGATGCG CAAGCTGCTG
GTCAACCTCG ACCGCAACGG CTTTGGCTAT ACGCTCGACC GCGAGACGGG CGAGCTGCTG
GTGGCCGAGA AGTATGATCC GGCGGTGAAC TGGGCCACGG AAGTGGTGAT GGACCCCGAG
TCCGACCAGT ATGGCCGTCC GCAGGTCGTG GCGGAATATT CGACCGCGCA GAACGGCGAG
GACACCAACA CCACCGGCGT CTGCCCGGCG GCGCTCGGGT CCAAGGACCA GCAGCCGGCG
GCCTTCTCGC CCAAGACGGG CCTCTTCTAC GTGCCGACCA ACCACGTCTG CATGGATTAC
GAGCCCTACC GGGTCAGCTA CACGGCCGGC CAGCCCTATG TGGGCGCGAC GCTCTCGATG
TATCCCGCGC CGGACAGCCA TGGCGGCATG GGCAATTTCA TTGCCTGGGA CGCCACCAAG
GGCGAGATCA AGTGGTCGCT GCCCGAGCAG TTCTCGGTCT GGTCGGGGGC GCTGGCCACC
GCGGGCGACG TCGTGTTCTA CGGCACGCTC GAAGGCCACC TCAAGGCGAT CGACGCCGAG
ACGGGCGAGC TTCTCTACCG CTTCAAGACC CCCTCGGGCG TCATCGGCAA CGTGATGACC
TACGAGCTGA ACGGCAAGCA GTACATCGGC ATCCTGTCGG GCGTCGGCGG CTGGGCCGGG
ATCGGTCTCG CGGCCGGCCT GACCAACCCG AACGAGGGTC TGGGCGCCGT GGGCGGCTAT
GCGGCGCTCT CGGACTACAC CGAGCTTGGC GGCCAGCTGA CCGTGTTCGC CGTGCCGGAC
TGA
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| Protein sequence | MKMLKRGLAA TLLLSSAPVY ANDSVMQAIG DSTQWAIQTG DYANTRYSEL DQINRENVGK
LQVAWTFSTG VLRGHEGSPL VIDGIMYVHT PFPNNVYALD LNNEGRILWR YEPQQNPDVV
GVMCCDTVNR GVAYADGMIF LHQADTTIVA LDAKSGEVKW SVVNGDPTKG ETNTATVLPV
KDKILVGISG GEFGVRGHLT AYDMQTGEQV WRAFSTGPDE EMLVDPEQTT HLGKPIGPNS
SLESWEGDQW QIGGGTTWGW YSYDPDLNLV YYGTGNPSTW NPSQRPGDNK WSMTIMARDV
DTGMAKWFYQ KTPHDEWDYD GVNENILVDQ EIDGQMRKLL VNLDRNGFGY TLDRETGELL
VAEKYDPAVN WATEVVMDPE SDQYGRPQVV AEYSTAQNGE DTNTTGVCPA ALGSKDQQPA
AFSPKTGLFY VPTNHVCMDY EPYRVSYTAG QPYVGATLSM YPAPDSHGGM GNFIAWDATK
GEIKWSLPEQ FSVWSGALAT AGDVVFYGTL EGHLKAIDAE TGELLYRFKT PSGVIGNVMT
YELNGKQYIG ILSGVGGWAG IGLAAGLTNP NEGLGAVGGY AALSDYTELG GQLTVFAVPD
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