Gene Rsph17025_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1875 
Symbol 
ID5084300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1926240 
End bp1926563 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content64% 
IMG OID640483436 
Productsarcosine oxidase, delta subunit, heterotetrameric 
Protein accessionYP_001168071 
Protein GI146277912 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4311] Sarcosine oxidase delta subunit 
TIGRFAM ID[TIGR01374] sarcosine oxidase, delta subunit family, heterotetrameric form 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.211862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.88306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCC TCGAATGTCC CTATTGCGGC GTGAAGGCCG AGGAGACCGA ACTGAGCCCG 
GGTCATGAAG CGCATCTGAA GCGCTTCGGA CCCGGCTCGT CGGACGAGGA TTTCGAATCC
TACATGTTCG CCCGGAAGAA CCCCAAGGGG GTTCATTTCG AGCGCTGGCG TCACAGCTAC
GGCTGCGGCA AGTGGTTCCT CGCCGCCCGC TGCACCGCGA CGCTCGAGGT GTTCGGCACC
TATCCCGCCC AGACCTCCGA GCCGCCCCCC GACATCGTGG CCCGAATCAA GGCCCGCCGA
CCGGAATGGG AGGGCTGCAA ATGA
 
Protein sequence
MLILECPYCG VKAEETELSP GHEAHLKRFG PGSSDEDFES YMFARKNPKG VHFERWRHSY 
GCGKWFLAAR CTATLEVFGT YPAQTSEPPP DIVARIKARR PEWEGCK