Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1838 |
Symbol | |
ID | 5084899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1877624 |
End bp | 1878301 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640483397 |
Product | hypothetical protein |
Protein accession | YP_001168034 |
Protein GI | 146277875 |
COG category | [S] Function unknown |
COG ID | [COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.107973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTTT GGCTTTCTCT CTCTTTGACA GTCGCGGCAA CGTCCGCCGC AGCGCAAGCC AGTTTTGACT GCTCGCGCGC CGGCACGATG GTGGAACATG CCATCTGCAG CGATCCCGCT CTCGCCGCGC TCGATCGCGA TGTCGCGCAA GCCTACGGGG CTGCGCGTGC CGGACAGCCC CCAGCCGCCC GCGATCAGCT CTTGGCCGAG CAGCGGGCGT GGCTCGCCGC CCGCGATGGC TGCGGCAGTG ACCGCATTTG TCTGAGTACT GCGATGCAGA ACCGTCTCTC CGCCCTCCAA GCTAGCGGAA AGGCGGCAGC GCCGCCGTCG GACGGCTTCA CCGGCCTTTA CTGCTCGGAG GGGGCGGTGA TGGGCATGCA ACTCGTGGGA AGCTCGCTGC GCTTCGATTT CATGGTCTTT TCCGGCATGC ACTCCTGCGG AACGCCCATC CTGACCGGTC AGCGCATCGG AGCGGGCTGG ACCGCCGTGG ACGGGGCCTG CCGGCTTCAC GTCACGGTCG AGGGCCCGGA CATCGTCGTG CGCACCGACA CGCCGGCCGC CTGCAAGGAA GCCTATTGCG GCGCGCGGGC GGCCATCGAC GAGTTCCACA TGCCTTATTC GGCCCGGCGC CCGGTCGCCG ATCCGTTCAT CGGAGGTGCC GGCGAGCGGT CGTGCTGA
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Protein sequence | MRLWLSLSLT VAATSAAAQA SFDCSRAGTM VEHAICSDPA LAALDRDVAQ AYGAARAGQP PAARDQLLAE QRAWLAARDG CGSDRICLST AMQNRLSALQ ASGKAAAPPS DGFTGLYCSE GAVMGMQLVG SSLRFDFMVF SGMHSCGTPI LTGQRIGAGW TAVDGACRLH VTVEGPDIVV RTDTPAACKE AYCGARAAID EFHMPYSARR PVADPFIGGA GERSC
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