Gene Rsph17025_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1838 
Symbol 
ID5084899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1877624 
End bp1878301 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID640483397 
Producthypothetical protein 
Protein accessionYP_001168034 
Protein GI146277875 
COG category[S] Function unknown 
COG ID[COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.107973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTT GGCTTTCTCT CTCTTTGACA GTCGCGGCAA CGTCCGCCGC AGCGCAAGCC 
AGTTTTGACT GCTCGCGCGC CGGCACGATG GTGGAACATG CCATCTGCAG CGATCCCGCT
CTCGCCGCGC TCGATCGCGA TGTCGCGCAA GCCTACGGGG CTGCGCGTGC CGGACAGCCC
CCAGCCGCCC GCGATCAGCT CTTGGCCGAG CAGCGGGCGT GGCTCGCCGC CCGCGATGGC
TGCGGCAGTG ACCGCATTTG TCTGAGTACT GCGATGCAGA ACCGTCTCTC CGCCCTCCAA
GCTAGCGGAA AGGCGGCAGC GCCGCCGTCG GACGGCTTCA CCGGCCTTTA CTGCTCGGAG
GGGGCGGTGA TGGGCATGCA ACTCGTGGGA AGCTCGCTGC GCTTCGATTT CATGGTCTTT
TCCGGCATGC ACTCCTGCGG AACGCCCATC CTGACCGGTC AGCGCATCGG AGCGGGCTGG
ACCGCCGTGG ACGGGGCCTG CCGGCTTCAC GTCACGGTCG AGGGCCCGGA CATCGTCGTG
CGCACCGACA CGCCGGCCGC CTGCAAGGAA GCCTATTGCG GCGCGCGGGC GGCCATCGAC
GAGTTCCACA TGCCTTATTC GGCCCGGCGC CCGGTCGCCG ATCCGTTCAT CGGAGGTGCC
GGCGAGCGGT CGTGCTGA
 
Protein sequence
MRLWLSLSLT VAATSAAAQA SFDCSRAGTM VEHAICSDPA LAALDRDVAQ AYGAARAGQP 
PAARDQLLAE QRAWLAARDG CGSDRICLST AMQNRLSALQ ASGKAAAPPS DGFTGLYCSE
GAVMGMQLVG SSLRFDFMVF SGMHSCGTPI LTGQRIGAGW TAVDGACRLH VTVEGPDIVV
RTDTPAACKE AYCGARAAID EFHMPYSARR PVADPFIGGA GERSC