Gene Rsph17025_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1812 
Symbol 
ID5083038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1855924 
End bp1856640 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content64% 
IMG OID640483372 
Producthypothetical protein 
Protein accessionYP_001168009 
Protein GI146277850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00550856 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAATC CTCCGATCGT GGTCTTCCAC CACTCGCAAA GCCGCGGCGG CAAGGTCGCG 
CAGGAGATCC TGAAGGGGTT CGCCGGCGGT ACGCTGCTGG TTGACGGCCA TGGCGGCTAC
GATCCGCTGG CCGACCCCAA GAAGACCGCG AAGCCCTGGA CCCTGGCCTT CTGCTGGACA
CATTGGAGGC GGCGCTTCGT CAAGTTCAGC CAGGACACGC CTTCGCCGAT CTGCGACGAG
ATGATCGCGC GGATCGCGCA GCTCTACGCC ATCGAGAAGG AGATCCGCGG CCGTGATCCC
GCCGCCCGCG TCACGGTCCG CCAGAAGTTC TCCAAGCCCA TCGTCGAGGC GCTGCGGCCC
TGGCTCGAGG GCTGCCTTCA GGATCTCTCC TCGTCCAACG AGCTCAGCAC GCACATCCGG
TACGGGCTGA AGAGATGGGA CGGCATGACC CGCTTTCTGG AGGATGGCCG GCTCGAGATG
GACACCAATG GGGTCGAGAA CGCGATCCGT CCGATTCCAC TTACAAGAAA GAATGCACTA
TTTGCCGGCT CCACGGATGG GGCGAAGACA TGGGCCCGCA TCGCCTCGCT GATCGGCACC
TGCCGTCTGA ACGGCGTGAA CCCCGAAGCC TACATCGCAG CGACGCTGCG CAAGATCCTC
GACCAACACA TGCAGAGCGA CATCGCCGCG CTGATGCCCT GGAACTTCCG CGAATAG
 
Protein sequence
MRNPPIVVFH HSQSRGGKVA QEILKGFAGG TLLVDGHGGY DPLADPKKTA KPWTLAFCWT 
HWRRRFVKFS QDTPSPICDE MIARIAQLYA IEKEIRGRDP AARVTVRQKF SKPIVEALRP
WLEGCLQDLS SSNELSTHIR YGLKRWDGMT RFLEDGRLEM DTNGVENAIR PIPLTRKNAL
FAGSTDGAKT WARIASLIGT CRLNGVNPEA YIAATLRKIL DQHMQSDIAA LMPWNFRE