Gene Rsph17025_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1788 
Symbol 
ID5083015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1833757 
End bp1835391 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content66% 
IMG OID640483348 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001167986 
Protein GI146277827 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTCT CCATCAAGCT GAAGCTCGTC GCGTCCTTTG TCGCGGTCCT GCTCGTGTCG 
GGTGGCGGGC AGATGATCGC CCTGCGGGAC ATCGCGCAAG TGCGCGCGTC GCTCGACGAC
ATCGTCCATC AGAAGGCGGC TCAGGTCGAG CTTGCCCATC GGATCATCGA GAACCAGCTG
AAGGTGCAGC GCGAGACCCG GAACTTTCTT CTGTCCCGCA CCCGGGACGA GCGCACCTCG
ATCGAGGCGC GAATGGCGCA GGCATCCGAA CGCATCAAGG ACGCGCTGGC CAGCCTTTCC
GCCACCGCCG ATGACGCCAC AACCGCCAGG CTGGCCGAGC TGCAGGCGGC CGAAATCCAG
CTCCGCGAGA TCGAGGGCAA GGCGATGGAC ATGGCGCGGA TGGGCCTTGG CTACGAAGCC
TTCAAGCTCG TCATGTCCGA AGGACGCGAT GACTGGCTGA AGATGGAAAG TCTGCTCGCC
AAGCTGCTGG TGCGGCAATC CAACCAGCTT GCCGCTGCGT CGGCCGAGGC GCGGCGCCAG
CAGGACGAAG GTCGCGCCGC GATCCTCATC ACGCTCGCGG CGAATGTCGG TCTTGTTGCC
CTGTGTGCAG GCTGGATCCT CGTCGCCCTC TCAAGGGGTC TGCGCCGCGC AACCGACCTG
TCCGAACGGG TGGCGGCCGG CGATCTCAGC CCCACCGAGC CGCTGAGGGG CAATGACGAA
ATCTCGGATC TGGTCGGTTC GCTCAACCGG ATGGTGGACA AGTTGCGCGG TGTGGTGGCC
GATGTGGCCA TATCCTCGCG CCATGTGGCC GAGGGGGCCG AAGAGATGTC CTCCACCGCG
GGGCAGCTCA GTCAAGCCGC GTCCGAACAG GCTGGATTGA CCCTGCAGGC CTCCTCCTCG
ATGGAAGAAA TGGCCGCAAC CATCCGCCAG TCAGCCCGCC ATGCGGCGGA TACCGAGACG
ATGGCTCGCA GGGCCGCGCA GGAAGCGCGC GACAGCGGGT CATGCGTGCT TGAGGCCGTC
GAAGCCGTTC GCGTCATCTC GCAGAGGATT GCCGTGGTCC AGGAGATCTC GCGCCAGACG
GATCTGCTTG CCCTCAATGC GGCGGTGGAA GCGGCGCGGG CTGGCGAACA CGGGCGCGGC
TTTGCCGTGG TGGCGGGTGA GGTGCGCAGG TTCGCCGAAC GCAGTCGGGC CGCGGCAGCC
GAGATCTCCG TGCTTTCGGC CTCCACCGTC GATGCCGCAC AGGCCGCCGG GGCGCGGCTG
TCTCACCTGA TTCCGGTCAT CGAGGAGACG GCGCGTCTGG TGCTCGGCAT CTCGACTTCG
GCTCAAGAGC AATCAGCCGG TGTGGCACAG GTCAATCTTG CCCTCCAGCA GCTCGACAAG
GTCACGCAGG TGAACAGCTC GGCCTCCGAA CAGCTGTCTG CCACCGCAGG GCACCTCGCC
GAGCAAGCCG TGCAGCTTCA GGCCGCGATC GCGTTCTTCG ACACCCACCG GGACTCAAGT
TCCGGCGTTG CGTCAGAGGC AGCCCGCTGC GGCCGGTCGC TGTCTGATGC AGCCGCACCC
GACATGGAAG CGGCCCGTGG ATACAGCAGC GACGTCTCCC GCGATCCGGC AGAGCCCATG
GCCCGATGTG CCTGA
 
Protein sequence
MRLSIKLKLV ASFVAVLLVS GGGQMIALRD IAQVRASLDD IVHQKAAQVE LAHRIIENQL 
KVQRETRNFL LSRTRDERTS IEARMAQASE RIKDALASLS ATADDATTAR LAELQAAEIQ
LREIEGKAMD MARMGLGYEA FKLVMSEGRD DWLKMESLLA KLLVRQSNQL AAASAEARRQ
QDEGRAAILI TLAANVGLVA LCAGWILVAL SRGLRRATDL SERVAAGDLS PTEPLRGNDE
ISDLVGSLNR MVDKLRGVVA DVAISSRHVA EGAEEMSSTA GQLSQAASEQ AGLTLQASSS
MEEMAATIRQ SARHAADTET MARRAAQEAR DSGSCVLEAV EAVRVISQRI AVVQEISRQT
DLLALNAAVE AARAGEHGRG FAVVAGEVRR FAERSRAAAA EISVLSASTV DAAQAAGARL
SHLIPVIEET ARLVLGISTS AQEQSAGVAQ VNLALQQLDK VTQVNSSASE QLSATAGHLA
EQAVQLQAAI AFFDTHRDSS SGVASEAARC GRSLSDAAAP DMEAARGYSS DVSRDPAEPM
ARCA