| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1783 |
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| Symbol | |
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| ID | 5083689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1825169 |
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| End bp | 1827355 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640483343 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001167981 |
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| Protein GI | 146277822 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTGA CACCGAAGGC CGAGGACCTC GTTCCTGAAA GCGACGTGGC CGCCATCATG
CGCGGCACGC ACGGCGACCC GTTCGGCGTG CTGGGGATGC ATGGCGGAGG GGGGACGCCC
CTCTCGGTGC GGGTCTTTGC CCCGCAGGCG GCCGAGGTCC GGGTTCTGGA CGGCGCGGGC
CAGCCCGTCG CCACGCTCGA CCGGATCGGC GCCGAGGGCT TCTTTGCCGG CATCGTGCCG
GGGGACGAGC CCTTCGCCTA TCGGCTCCGC TTCTGCTCGG GCCCGCACGA ATGGGAGGCC
GAGGATCCCT ACCGCTTCCC GGCCGTGCTG GGCGAGCTGG ACGAATATCT CATGGGCGAG
GGGCGGCACT ACCAGCTCTA CACCCGGCTC GGCGCCCATC CCGTGACGCT GGAGGGGGTC
GAGGGCGTGA GCTTTGCCGT CTGGGCCCCG AGCGCCCGGC GCGTGTCGGT CGTGGGGGCC
TTCAACGCCT GGGACGGCCG TCGCCACCCG ATGCGCAAGC GGATCGGCGT CGGCGTGTGG
GAGCTGTTCA TTCCCGGCCT GCAGGTCGGG GATCTCTACA AGTACGAGAT CCTCGGGCCG
TCGGGCGAGC GGCTGCCGCT CAAGTCCGAC CCGCTCTCCT TCGCGCAGGA GGCGCCGCCC
GCGACGGCCT CGCTGGTCCA CGGCCTGCCC GAACCCGACT GGCACGACGC CGGCTGGATG
CAGGAGCGCG CGAGCCGGCA GGACCGCAGC GCGCCGATCT CGATCTACGA GGTTCATGCG
GGCTCGTGGA AGCTTGGCCT CGACTACGAC GCGCTGGCCG AGGAGTTGGC AACTTATGTG
CGCGAGATGG GCTTCACCCA TGTCGAGTTC CTGCCGATCA GCGAACATCC CTTCACCGGC
TCGTGGGGCT ACCAGCCCAT CGGCCTCTTT GCCCCCACCG CCCGCTTCGG CCCGCCCGAG
GGCTTCGCGC GGCTGGTGGA CCGGCTGCAC CGCGAGGGGA TCGGCGTCAT CCTCGACTGG
GTGCCGGCGC ATTTCCCCTC GGACGCGCAC GGGCTGGCCA ATTTCGACGG CACGCACCTT
TACGACCACG CCGACCCGCG GCAGGGCTTC CACCGCGACT GGAACACCCA GATCTACAAT
TTCGGCCGGC AGGAGGTGGC GAACTTCCTT CAGGCCTCGG CGCTCTTCTG GCTTGACCGC
TACCATGTCG ATGCGCTCCG GGTCGATGCG GTGGCCTCGA TGCTCTACCT CGACTATTCG
CGCAACGCGG GCGAATGGGT GCCCAACCGC CACGGCGGCC GCGAGAATCT CGAGGCGATC
GACTTCCTGC GCGCGGTGAA CGAGCGGGTG CGGATCGACC ATCCGGGCTG CATCACCATC
GCCGAGGAAT CCACGGCCTT CCCGCAGGTC AGCCGCCCGG TGCAGGAGGG CGGGCTCGGC
TTCGGCTTCA AGTGGAACAT GGGCTGGATG CACGACACGC TGGGCTACTT CCGGCGCGAT
CCGATCCACC GCAGGCACCA CCAGAACGAC CTGACCTTCG GCATGGTCTA TGCCTTCTCC
GAGGATTTCG TGCTGCCGCT CAGTCACGAC GAGGTGGTGC ACGGGAAAGG CTCGCTCATC
GGGCAGATGG CGGGCGACCG CTGGCAGAAG TTCGCCAACC TGCGCGCCTA CTTCGGCTTC
ATGTGGGCCC ATCCCGGCAA GAAGCTGCTG TTCATGGGCG GCGAGTTCGC GCAGGAGCGC
GAGTGGAACC ATGACGCCTC GCTGGACTGG CATCTGCTCG ACGATCCGGC CCATTCGGGC
ATGAAGCGTC TGGTCGCCGA CCTGAACCGG GAATACCGCC GGCTGCCGGC GCTGCACCGG
ATGGATTGCG ACCCCGAGGG CTTCGAGTGG ATCGACGCGG GCGACACCGA GAACAGCGTG
CTCAGCTTCC TGCGCAAGGC ACCGGGGGAA AAGCCGGTTC TGGCGGTCTG CAACCTGACA
CCCGTGGTGC GCTCCGACTA CCGCATCGGG GTGCCGCAAG GCGGCGAGTG GCGCGAGATC
CTCAATTCCG ACGCGGCGAT CTACGGCGGG TCGGACGTGG GCAACCCCGG CTCGCTGCAG
GCCGAGGAGG TCTCGTGGCA CGGGCGGCCG TTCTCGGTCC GCCTGACCCT GCCGCCGCTC
GCCACCATTC TGGTCACGCC TGCATGA
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| Protein sequence | MNVTPKAEDL VPESDVAAIM RGTHGDPFGV LGMHGGGGTP LSVRVFAPQA AEVRVLDGAG
QPVATLDRIG AEGFFAGIVP GDEPFAYRLR FCSGPHEWEA EDPYRFPAVL GELDEYLMGE
GRHYQLYTRL GAHPVTLEGV EGVSFAVWAP SARRVSVVGA FNAWDGRRHP MRKRIGVGVW
ELFIPGLQVG DLYKYEILGP SGERLPLKSD PLSFAQEAPP ATASLVHGLP EPDWHDAGWM
QERASRQDRS APISIYEVHA GSWKLGLDYD ALAEELATYV REMGFTHVEF LPISEHPFTG
SWGYQPIGLF APTARFGPPE GFARLVDRLH REGIGVILDW VPAHFPSDAH GLANFDGTHL
YDHADPRQGF HRDWNTQIYN FGRQEVANFL QASALFWLDR YHVDALRVDA VASMLYLDYS
RNAGEWVPNR HGGRENLEAI DFLRAVNERV RIDHPGCITI AEESTAFPQV SRPVQEGGLG
FGFKWNMGWM HDTLGYFRRD PIHRRHHQND LTFGMVYAFS EDFVLPLSHD EVVHGKGSLI
GQMAGDRWQK FANLRAYFGF MWAHPGKKLL FMGGEFAQER EWNHDASLDW HLLDDPAHSG
MKRLVADLNR EYRRLPALHR MDCDPEGFEW IDAGDTENSV LSFLRKAPGE KPVLAVCNLT
PVVRSDYRIG VPQGGEWREI LNSDAAIYGG SDVGNPGSLQ AEEVSWHGRP FSVRLTLPPL
ATILVTPA
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