Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1721 |
Symbol | |
ID | 5084676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1770207 |
End bp | 1771205 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640483281 |
Product | phage integrase family protein |
Protein accession | YP_001167919 |
Protein GI | 146277760 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.108351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAGT TTCGGATCGG ACGCCTCAAC GGGCGGTTCG TCGTCTCATG GTGGGAGGAT GGAGCCCGGC GGCGCTATCG TCTTGACGCA CGCACGCGAG CGGAAGCCGA GGTCGAGGCG CTAGACCGGA TCCGCAGGGA AACCCTGCCC GCCGGGGCGA CGACCGTCCG AGATCTGTGG GCTGCCTACC TTGCCGATCG CAGGGGCCGC CCGGTCGAGC GCAACATGCG GTCGAGCGGC AACGCCGTCC TGCCGCACTT CGGCGCGCTG CGGCCCGATC AGATCACGCC AGAAGCCTGC CGGAGCTACA CGAAGGCGCG GCGCAAGACG GTCTCGGTCG GCACGGTCTG GACGGAGCTG GGCCACCTGC GGACATGCCT GCTCTGGGCG GCCAAGCGCG GCCTGATCCC GGTGGCGCCG CACATCGAGA GGCCCGCCAA GCCAGCGCCG CGGGACCGCT ATCTGACGCA TGCCGAAGTG TCGAGGCTGA TGGAGGCCGA GTGCGAGCCG CACATCAAGC TGGCGATCAC CGTCCTGCTG ACGACGGCCG CTCGCGTCGG GGCGGTGCTG GAGCTGACCT GGGATCGGGT TGACCTCGAG CGGGGCCAGA TCCGGTTGCG CGTCGATGCC GAGGGACCGC GAAAGGGCAG GGCGACCGTG CCAATCAACA ACACGCTGCG GGCGGCGCTC ACGGCGGCTC GAGCTGCCGC GCTCTCTGAC CATGTGATCG AGTGGGCGGG TGGGCCCGTC AAGTGCATCC GCAAGGGCTT CCTGCGGGCG GTCTCCAATG CCGGCCTGTC GGACGTGACC CTGCACACCC TGCGCCACAC GGCCGCGGTC CACATGGCCG AGGCCGGAGT GCCCATGGAC GAGATCAGCC AATATCTCGG CCACTCGAAC GTGCAGATCA CCTCCAGCGT CTATGCCAGA TTCTCTCCGC AGCACCTGCG GAAGGCCGCG GATGCGCTGG AGTTCGGGGC TCTGCGGGTC GTGAAATGA
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Protein sequence | MREFRIGRLN GRFVVSWWED GARRRYRLDA RTRAEAEVEA LDRIRRETLP AGATTVRDLW AAYLADRRGR PVERNMRSSG NAVLPHFGAL RPDQITPEAC RSYTKARRKT VSVGTVWTEL GHLRTCLLWA AKRGLIPVAP HIERPAKPAP RDRYLTHAEV SRLMEAECEP HIKLAITVLL TTAARVGAVL ELTWDRVDLE RGQIRLRVDA EGPRKGRATV PINNTLRAAL TAARAAALSD HVIEWAGGPV KCIRKGFLRA VSNAGLSDVT LHTLRHTAAV HMAEAGVPMD EISQYLGHSN VQITSSVYAR FSPQHLRKAA DALEFGALRV VK
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