Gene Rsph17025_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1683 
Symbol 
ID5083415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1727076 
End bp1727906 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content63% 
IMG OID640483241 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001167881 
Protein GI146277722 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCC GCATCACAGC CCGACGCACC CTGATCGTCA CGCTCGCCGC GTGGACCGTG 
GGTCTGCTCA TCTTCTTCCC GATCCTCTGG ACCGTGCTGA TGAGTTTCAA GACCGAAGGC
GACGCCATCA AGGCGCCCTT CGCCATGCTG TTCTCGGACT GGACGCTGAT CAGCTACGAA
CAGGTCCAGA CGCGATCCAA CTATTCGCGC CACTTCATGA ACTCGGTGGT GATCTCGCTC
GGCTCCACCC TTCTTGCGCT GGCGATCGCC ATTCCGGCCG CCTGGGCCAT GGCCTTCGTG
CCGGGCAAGC GGACCAAGGA TGTGCTGATG TGGATGCTCT CCACCAAGAT GATGCCGGCG
GTGGGCGTGC TGATCCCGAT CTACCTGATC TTCCGCGACA CCGGGCTTCT CGACACCCGC
ATCGGCCTCG TGATCGTGCT GACGCTCATC AACCTGCCGA TCGTGGTCTG GATGCTCTAC
ACCTACTTCA AGGAGATCCC CGGAGAGATC CTCGAGGCGG CGCGGATGGA CGGCGCCACG
CTCGGCTCCG AGATCCTCTA CGTACTGACG CCGATGGCCA TTCCGGGGAT CGCCTCGACG
CTGCTGCTGA ACGTCATCCT CGCCTGGAAC GAGGCCTTCT GGACGCTTCA GCTGACCACC
TCGCGCGCGG CGCCGCTGAC GCAGTTCATC GCCAGCTATT CCAGCCCCGA GGGCCTGTTC
TACGCGAAAC TTTCGGCGGC CTCGACCATG GCGATCGCGC CGATCCTGAT CCTTGGCTGG
TTCAGCCAGA AGCAACTCGT CCGCGGCCTG ACCTTCGGCG CGGTGAAGTG A
 
Protein sequence
MSRRITARRT LIVTLAAWTV GLLIFFPILW TVLMSFKTEG DAIKAPFAML FSDWTLISYE 
QVQTRSNYSR HFMNSVVISL GSTLLALAIA IPAAWAMAFV PGKRTKDVLM WMLSTKMMPA
VGVLIPIYLI FRDTGLLDTR IGLVIVLTLI NLPIVVWMLY TYFKEIPGEI LEAARMDGAT
LGSEILYVLT PMAIPGIAST LLLNVILAWN EAFWTLQLTT SRAAPLTQFI ASYSSPEGLF
YAKLSAASTM AIAPILILGW FSQKQLVRGL TFGAVK