Gene Rsph17025_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1682 
Symbol 
ID5083414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1726202 
End bp1727074 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content64% 
IMG OID640483240 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001167880 
Protein GI146277721 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCC AGCACTCCAA GACTGCGGCG CGTCTGATGA TTTCGCCGGC CGTCATCCTG 
CTTCTGCTGT GGATGATCGT GCCGCTGTCG ATGACGCTCT ATTTCAGCTT CCTGCGCTAC
AATCTCCTCA TGCCGGGGAT GGAGAGCTTC ACCGGCTGGG ACAATTACTA CTACTTCCTG
ACCGACCCCG CCTTCTCGGC GGCGCTGACC AACACGATCC TGCTGGTGGG GGGCGTTCTG
CTGATCACCG TGGTGGGCGG CACCCTGCTG GCGCTGCTGC TCGACCAGCC GATGTGGGGC
CAGGGGATCG TGCGGATCCT GGTGATCGCG CCCTTCTTCA TCATGCCCAC CGTCTCGGCG
CTGGTCTGGA AGAACATGTT CATGAACCCC GTGAACGGCA TGTTCGCCCA TATCGCCCGG
GCGCTGGGGA TGCAGCCCTT CGACTTCCTC GCCCATGCGC CCTTGGCCTC GATCATCGGC
ATCGTCGCCT GGCAATGGCT GCCCTTCGCC ACGCTGATCC TGCTGACCGC GCTGCAGTCG
CTCGATCGCG AGCAGATGGA GGCGGCCGAG ATGGACGGCG CGGGCCCGCT CGATCGCTTC
CTCTACATCA CCCTGCCGCA CCTGACGCGC GCGATCACCG TGGTCGTGCT GATCCAGACC
ATCTTCCTTC TGGGTGTCTT CGCCGAGATC CTCGTGACCA CCAACGGCGG TCCGGGCACG
GCCTCGACCA ACATCACCTA TCTCGTCTAT GCGCAGTCGC TGTTGAACTA CGACGTGGGC
GGCGGCTCGG CGGGCGGGAT CATCGCCGTC ATCCTCGCCA ACATCGTGGC CATCTTCCTG
ATGCGCATGA TCGGCAAGAA CCTGGACGCC TGA
 
Protein sequence
MATQHSKTAA RLMISPAVIL LLLWMIVPLS MTLYFSFLRY NLLMPGMESF TGWDNYYYFL 
TDPAFSAALT NTILLVGGVL LITVVGGTLL ALLLDQPMWG QGIVRILVIA PFFIMPTVSA
LVWKNMFMNP VNGMFAHIAR ALGMQPFDFL AHAPLASIIG IVAWQWLPFA TLILLTALQS
LDREQMEAAE MDGAGPLDRF LYITLPHLTR AITVVVLIQT IFLLGVFAEI LVTTNGGPGT
ASTNITYLVY AQSLLNYDVG GGSAGGIIAV ILANIVAIFL MRMIGKNLDA