Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1682 |
Symbol | |
ID | 5083414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1726202 |
End bp | 1727074 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640483240 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001167880 |
Protein GI | 146277721 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGACCC AGCACTCCAA GACTGCGGCG CGTCTGATGA TTTCGCCGGC CGTCATCCTG CTTCTGCTGT GGATGATCGT GCCGCTGTCG ATGACGCTCT ATTTCAGCTT CCTGCGCTAC AATCTCCTCA TGCCGGGGAT GGAGAGCTTC ACCGGCTGGG ACAATTACTA CTACTTCCTG ACCGACCCCG CCTTCTCGGC GGCGCTGACC AACACGATCC TGCTGGTGGG GGGCGTTCTG CTGATCACCG TGGTGGGCGG CACCCTGCTG GCGCTGCTGC TCGACCAGCC GATGTGGGGC CAGGGGATCG TGCGGATCCT GGTGATCGCG CCCTTCTTCA TCATGCCCAC CGTCTCGGCG CTGGTCTGGA AGAACATGTT CATGAACCCC GTGAACGGCA TGTTCGCCCA TATCGCCCGG GCGCTGGGGA TGCAGCCCTT CGACTTCCTC GCCCATGCGC CCTTGGCCTC GATCATCGGC ATCGTCGCCT GGCAATGGCT GCCCTTCGCC ACGCTGATCC TGCTGACCGC GCTGCAGTCG CTCGATCGCG AGCAGATGGA GGCGGCCGAG ATGGACGGCG CGGGCCCGCT CGATCGCTTC CTCTACATCA CCCTGCCGCA CCTGACGCGC GCGATCACCG TGGTCGTGCT GATCCAGACC ATCTTCCTTC TGGGTGTCTT CGCCGAGATC CTCGTGACCA CCAACGGCGG TCCGGGCACG GCCTCGACCA ACATCACCTA TCTCGTCTAT GCGCAGTCGC TGTTGAACTA CGACGTGGGC GGCGGCTCGG CGGGCGGGAT CATCGCCGTC ATCCTCGCCA ACATCGTGGC CATCTTCCTG ATGCGCATGA TCGGCAAGAA CCTGGACGCC TGA
|
Protein sequence | MATQHSKTAA RLMISPAVIL LLLWMIVPLS MTLYFSFLRY NLLMPGMESF TGWDNYYYFL TDPAFSAALT NTILLVGGVL LITVVGGTLL ALLLDQPMWG QGIVRILVIA PFFIMPTVSA LVWKNMFMNP VNGMFAHIAR ALGMQPFDFL AHAPLASIIG IVAWQWLPFA TLILLTALQS LDREQMEAAE MDGAGPLDRF LYITLPHLTR AITVVVLIQT IFLLGVFAEI LVTTNGGPGT ASTNITYLVY AQSLLNYDVG GGSAGGIIAV ILANIVAIFL MRMIGKNLDA
|
| |