Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1680 |
Symbol | |
ID | 5083412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1723736 |
End bp | 1724689 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640483238 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_001167878 |
Protein GI | 146277719 |
COG category | [K] Transcription |
COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.388051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACC GGCCCGAGAG CGAGCCGACG CCGCTGGATG ATGCCGCCCG CGCCGGCTGG CTCTATTACG TCGCGGGCCT GACGCAGGAC CAGATCGCGC GCGAGCTGGG CACCTCGCGC CAGCGGGCGC AGCGGCTGGT GAGCCGGGCG ATCTCCGAGC GGCTGATCCA TGTCCGGCTC GAGCATCGCG TGTCGGGCTG CCTGCATCTC GAGGCCGCGC TGACCCGGCG CTTCGGGCTG AAGCTTGCCC GGGTCGCGCC GAGCATCGGG GCGGATGTCG ATCCCCTGCC CTCGATCGCA CCCACCGCCG CCGCCGAGGT GGAACGCGTC CTGCGCTCGG AGCGGCCGAT GGTGGTGGCC TTCGGCACCG GACGGTCGCT GCGCGCCACG GTGGAAGAAA TGACGTCCAT GGTCTGCGAA CAGCACAAGA TCGTCTCGCT GAACGGCAAC ATCTCGGCGG ACGGGTCGGC CTCCTACTAC GACGTGATCT TCCGCATCGC CGACCGGGTG CGGGCGCCGC ACTATCCGAT GCCGATGCCG GTGATCGCGC AGGACGCCGC CGAGCGTGAG CTGTTCCACG CGCTCAAGCC GGTGCAGTCG GTGCTGAGGC TGGCGCGCAA CGCCGACGTG ACCTTCGTGG GGCTGGGCCA GATGGGCGCG GATGCGCCGC TGCTCAAGGA CGGCTTCATC ACGGCCGCCG AGCTGGAGGA GATGCAGCAG CTCGGGGCGG CCGGAGAGGT CGCGGGCTGG GTGTTCGACT CGGATGGGCG TTATCTCGAG ACGAGCATCA ACCAGCGCGT CGCAGGCGTC CGGGTCGAGA TTTCGGGCGA TCGGACGGCC GTCGCCATCG CCGGCGGCAA GCCCAAGCTC GCTGCGCTGC GCGCAGGCCT GAAGGGACGC CTTTTCAACG GCCTGATCAC CGACGAGCTG ACAGCGCAGG CACTCCTGTC CTGA
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Protein sequence | MIDRPESEPT PLDDAARAGW LYYVAGLTQD QIARELGTSR QRAQRLVSRA ISERLIHVRL EHRVSGCLHL EAALTRRFGL KLARVAPSIG ADVDPLPSIA PTAAAEVERV LRSERPMVVA FGTGRSLRAT VEEMTSMVCE QHKIVSLNGN ISADGSASYY DVIFRIADRV RAPHYPMPMP VIAQDAAERE LFHALKPVQS VLRLARNADV TFVGLGQMGA DAPLLKDGFI TAAELEEMQQ LGAAGEVAGW VFDSDGRYLE TSINQRVAGV RVEISGDRTA VAIAGGKPKL AALRAGLKGR LFNGLITDEL TAQALLS
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