Gene Rsph17025_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1643 
Symbol 
ID5082721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1686694 
End bp1687488 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content78% 
IMG OID640483201 
Producthypothetical protein 
Protein accessionYP_001167841 
Protein GI146277682 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0152574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC GGACGCCCAT GGGACCCGAG GATGTGCTGG CGCTGATCCG CGAGTCGAAC 
GCGCGCGGAT TTGGCCGCTC GGCGGTGCCG GTGCGCGCGC CGGCCGAACC GTTCCGCCCC
ACGCCCCTTG CGGGGCTCGT GCGCGACGTG GCCCCCGAAG GGGCCGCCCT GCCGGTGCTG
GAACCGGAAC CGCCGGCGCC GCCCGCCCCC GCCCTGCCCG ATCCTGTGCC GCCCGATCCC
GCGCTCCTCG AGGCCGCCCG CGCCGAGGGT CGCCGCGAGG GCCATGCGGA AGGTCTGGCC
GAGGGCCGCG CCGCGGGCCG TGCCGAGGCC GAGGCCGCGC TCAGTTCCGC ACGCGACACG
TTCCTGCAGC TCGCCGCGCG GCTGTCGGCG CCCACCCCCG CCGATACGGC GCGGCTTGCC
CAGCTGATCG AGGGCGCGGT CCGGGCCCTG GCGAGCCAGC GCGCGGGCCT CGCCATCGAC
GCCCACCCCG AGGCCTTCGC CGCCCGGATC GAGACGCTGG CCGACCGGGT GGCGCAGGGC
CTGCGCGAGG TGACGCTGCG GCTCAATGCC GAGGATCTGC GCGCCGTCGC CCCGCATCTC
GAGGCCGGAG GGATCTGTCC GCCGACGCGG ATCACGGCCG ATCCAAGGCT GGCCCGCGGC
GATCTGGAGG TGCGCGCCGA GGGGATCGTG CTCGCCGACC TGATCGGAGT CGCGCCTCTG
GCCGCCGCCC CCCGCCGCGA TCCGGAGACC GCGCCCGCCG ACGCCATCGG CGCTTCGGCC
GCGGCGGCCT CATGA
 
Protein sequence
MNARTPMGPE DVLALIRESN ARGFGRSAVP VRAPAEPFRP TPLAGLVRDV APEGAALPVL 
EPEPPAPPAP ALPDPVPPDP ALLEAARAEG RREGHAEGLA EGRAAGRAEA EAALSSARDT
FLQLAARLSA PTPADTARLA QLIEGAVRAL ASQRAGLAID AHPEAFAARI ETLADRVAQG
LREVTLRLNA EDLRAVAPHL EAGGICPPTR ITADPRLARG DLEVRAEGIV LADLIGVAPL
AAAPRRDPET APADAIGASA AAAS