| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1618 |
|---|
| Symbol | |
|---|
| ID | 5082174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 1662491 |
|---|
| End bp | 1664599 |
|---|
| Gene Length | 2109 bp |
|---|
| Protein Length | 702 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640483176 |
|---|
| Product | flagellar biosynthesis protein FlhA |
|---|
| Protein accession | YP_001167816 |
|---|
| Protein GI | 146277657 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
|---|
| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0469489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGG TCTCGGCCAG GCAAGGCTGG GGCGCGCAGC TGGGCGGCAT GACGCTGCCG
CTGGGCATCC TCGCGGTGGT CGCGATGATG GTGCTGCCGC TGCCGGTGGT GCTGCTCGAC
ATCTTCTTCG TCGGCAACAT CCTTCTGTCG CTGCTGATCC TGATGGTGGC GCTGCACACC
TTCCGGCCGC TCGATTTCTC GAGCTTCCCC AGCATCCTTC TTGTCGCCAC CGTCCTGCGC
CTGGCGCTGA ACGTGGCCTC GACGCGGATC GTGCTCAGCA ACGGGCACAC CGGGGCGGAT
GCGGCGGGCA AGGTGATCGA GGCCTTCGGC TCCTTCGTGA TCGGCGGCAA TTTCGTCGTG
GGGACCTTCG TCTTCGCGAT CCTCGTCATC ATCAACCTTG TCGTCATCAC CAAGGGCGCG
GGTCGGGTGT CCGAAGTCTC GGCGCGCTTC ACGCTCGACG CGATGCCGGG CAAGCAGATG
GCCATCGACG CCGATCTGAA CGCGGGTCTC GTGACGCCCG ACGAGGCGCG CGAGCGGCGG
GCCGACGTGG CGGCCGAGGC GGACTTCTAC GGCGCCATGG ACGGGGCCTC CAAATTCGTG
AAGGGCGACG CGCTGGCGGG CATCCTGATC CTGATCATCA ACATCGTGGG CGGCATCGTG
ATCGGCACGC TGCAGCACGG TCTGGGGGTG ATGCAGGCGG CCGAGACCTA TGTGCTGCTC
TCGATCGGCG ACGGGCTGGT GGCGCAGATC CCTTCGCTGC TGCTGTCCAT CGCCACGGCG
ATCATCGTCA CGCGCGTCTC CTCGAGCACC GACATGAGCG TGCTCATCGG CAAGCAGATG
GGGATCGGCC GGGCCTGGGT GCCGGTGGCG GCGGTGATGC TGATCCTCGG GCTGACGCCG
GGGATGCCGA ACCTGCTCTT CCTGATCGGG GGGGGCGCCG CCGCCGCCAT GGCCTGGGTC
ACGCTTTCGC GCGATCGCAC GCGGGCCGAG CCCGCCCCGG CCGCAGCCGG AGGGCAGCCC
GCGGCCGACG CCCGCCCCGC CGCCGGCCCC GAGGCGATCA CGGCCGAGGA GGTGACCGAC
TATGCGCCGG TCTCGCTCCA GATCGGCTAC GGGCTGATCC CGCTGGCGGG CGACAACGGC
GGCGCACTGG TGGCGCGCAT CACCGCGATC CGGCGCGACG TGTCGAAGGC CCTTGGCTTC
GTCGTGCCGG GGGTGCGCAT CCGGGACGAT CTGGCCCTTG CGCCGAACCA GTACCGCATC
CGGGTGGGGC AGGCGATCCT GGCCGAGGAC ACGGTCTATC CCGACCGCAA GCTCGCGCTG
CCCGGGGGCG GCTCGCGCAG GAAGCTGAAC GGGATCTCGG TCAAGGACCC GAGCTTCGGC
CTCGACGCCA CCTGGATCCT GCCGCATCAG GTGGCCGAGG CCGAGGCGGA CGATCATGTG
GTGGTCGAGC CCGAGTCCGT CATCGCGACC CACCTGAGCC AGATCCTCGT CAAGCACGCG
GCGCAGCTGA TCGGGCAGGA CGATGTGCAG GGGCTGGTGG ACAATCTCGC CCGCTCCGCG
CCGACGCTGG TGCAGTCGGT GGTGCCCAAG CTGGTGCCGC TGCATGTGCT GACGGCGGTG
CTCAAGGCGC TTCTGGCCGA CCGCATCCCG GTCTCGGACA TGCGCCGCAT CCTCGAGGGC
CTGTCGGACC TGGCCGGGCG CAACCTCGCC CCGGCCGACA TGGCCGAGGC GCTGCGCCCG
GCCCTCGTGC CGCTCCTGCT GCAGCAGATG GGGCCGGTCA GCCAGCCGCT GCCGCTGATC
ACGCTCGAGC CGGATCTCGA GCAGCTCCTG CTGCGCTCGC GCCGGCAGGG CGACGAGATG
CTGCTGGTGG ACAACGGGCT GGCCCAGTCG CTGCTGACGG CCCTCTCGGA ACGTCTGGAG
GTGGCGTCGG GGCAGGGCAA GCAGGCGGTG GTGATCGTGG CCCAGCCGCT GCGGCGGGCT
TTTGCGGCCT TCATACGGCC GCATCTGCCC GATGCCGTGG TGATCGGCAT GGGCGAGCTG
CCCGAGGCGC GGCGGGTCGA GGTGCTGGGC ACCGTGGGCG GCGCCTCGGC GCTGCCGCCG
GGGAGGTAA
|
|---|
| Protein sequence | MSTVSARQGW GAQLGGMTLP LGILAVVAMM VLPLPVVLLD IFFVGNILLS LLILMVALHT
FRPLDFSSFP SILLVATVLR LALNVASTRI VLSNGHTGAD AAGKVIEAFG SFVIGGNFVV
GTFVFAILVI INLVVITKGA GRVSEVSARF TLDAMPGKQM AIDADLNAGL VTPDEARERR
ADVAAEADFY GAMDGASKFV KGDALAGILI LIINIVGGIV IGTLQHGLGV MQAAETYVLL
SIGDGLVAQI PSLLLSIATA IIVTRVSSST DMSVLIGKQM GIGRAWVPVA AVMLILGLTP
GMPNLLFLIG GGAAAAMAWV TLSRDRTRAE PAPAAAGGQP AADARPAAGP EAITAEEVTD
YAPVSLQIGY GLIPLAGDNG GALVARITAI RRDVSKALGF VVPGVRIRDD LALAPNQYRI
RVGQAILAED TVYPDRKLAL PGGGSRRKLN GISVKDPSFG LDATWILPHQ VAEAEADDHV
VVEPESVIAT HLSQILVKHA AQLIGQDDVQ GLVDNLARSA PTLVQSVVPK LVPLHVLTAV
LKALLADRIP VSDMRRILEG LSDLAGRNLA PADMAEALRP ALVPLLLQQM GPVSQPLPLI
TLEPDLEQLL LRSRRQGDEM LLVDNGLAQS LLTALSERLE VASGQGKQAV VIVAQPLRRA
FAAFIRPHLP DAVVIGMGEL PEARRVEVLG TVGGASALPP GR
|
|---|
| |