| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1569 |
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| Symbol | |
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| ID | 5082380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1608593 |
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| End bp | 1610191 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640483127 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001167767 |
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| Protein GI | 146277608 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.583345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCT TCGCAACCCT GTTCGACCTG CTCGACCGCA CCACGCGCAC CTCCGCCAAG
GTGGCGGCTC TGGCCGACTA TTTCCGCGAC GCGCCCGAGG AGGACCGGGT CTGGACGATC
GCGCTTCTTT CGGGCCGCCG GCCGAAGCGC TCCGTGAACG CGACCGAACT GCGCAGCTGG
GCCGCCGAGG CCGCGGGCCT GCCCGTCTGG CTGGCCGAGG AGGTGCATCC GATCGTGGGT
GACCTCGCCG AGACGATCTC GCTCATCCTG CCCGAGCCCA CGCGTGCCAG CGACCGGACG
CTCGACGACT GGATGCGGAT GCTGATCGCG CTCACCGGCC GCCCCGCCGA GGAGCGGCGT
GCGGCGATCC TCGACGCCTG GGACCGGCTG ACCACGCCCG AACGGTTTCT CTTCAACAAG
CTCATCACCG GCGGCTTCCG CATGGGCGTG AGCCAGGGGC TGATGACGCG CGCCCTTGCG
CAGGCCACGG GCGTTGACGA GGCGGTGCTG GCGCATCGTC TGATGGGCGA CTGGAACCCC
GCGCGGATCC GGTTCGAGAC GCTGATCGGC GCGCATGACC CCGAGGCGGA TGCCTCGAAA
CCCTACCCGT TCGCCCTGGC TTCGCCGGTC GAGGATGTGG CGGCGCTGGG GCCGCCCTCG
GACTGGCTTG CGGAATGGAA ATGGGACGGC ATCCGCGGCC AGCTCGTGAA TCGCGCGGGC
GCCTTCGCGC TCTGGTCGCG CGGCGAGGAG CTGGTCACGG ACCGTTTTCC CGACCTCGCC
CCCCTGCGCG ACTTCCTGCC CCCCGGCCTC GTGATCGACG CCGAGGTGCT GGCCTGGGGC
GGCGAGGCTC CCCTGCCCTT TGCCGCGCTC CAGAAGCGGA TCGGTCGACT GACGGTCCCG
AAGAAGCTCC TCGCCGAGGC GCCCGCGCAT CTTCTGGCCT ACGACCTGCT GGAAGAGAAC
GGCGAGGATC TGCGCGCCGC CCCGCTCGCG CACCGACGCG CGCGGCTCGA GGCGGTTCTG
GCCGCCCTCC CGCCGGGCCT GCCCATCGCC CCCTCGCCGC TGGTGTCCTT CGACGACTGG
GAGACGCTGG GCCAGATCCG CGCCACCGCC CGCGCCAGGA TCGCCGAGGG GCTGATGCTG
AAGCGGGCCT CCTCGCCCTA TTTCGTCGGC CGCAAGCGCG GCGACTGGTG GAAATGGAAG
CTCGACCCCT ACACGGTCGA TGCGGTGATG CTCTATGCCC AGCAAGGGGC CGGGCGGCGG
GCGACTCTCT TTACCGACTT CACCTTCGGG GTGCGCGATG GCGACGATCT GGTGCCCTTC
ACCAAGGCCT ATTCGGGCCT GACCGACGCC GAGTTCCGGC AGATCACCGA CTGGGTGCGC
AAGAACACGC TGGAACGGTT CGGCCCCGTG CGCCGCGTGC CGCCCGAGCT TGTGTTCGAA
CTGGCCTTCG AGGGCATCCA GGCCAGTCCG CGCCACAAGT CGGGCATCGC CTTGCGCTTT
CCGCGCATGG TGCGCTGGCG GAAGGACAAG CCCGCGGCCG AGATCGACAC GCTGGAGAGC
CTGCGCGCGC TTCTCGCCAG CACCGGCGCC GCCCCATGA
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| Protein sequence | MKRFATLFDL LDRTTRTSAK VAALADYFRD APEEDRVWTI ALLSGRRPKR SVNATELRSW
AAEAAGLPVW LAEEVHPIVG DLAETISLIL PEPTRASDRT LDDWMRMLIA LTGRPAEERR
AAILDAWDRL TTPERFLFNK LITGGFRMGV SQGLMTRALA QATGVDEAVL AHRLMGDWNP
ARIRFETLIG AHDPEADASK PYPFALASPV EDVAALGPPS DWLAEWKWDG IRGQLVNRAG
AFALWSRGEE LVTDRFPDLA PLRDFLPPGL VIDAEVLAWG GEAPLPFAAL QKRIGRLTVP
KKLLAEAPAH LLAYDLLEEN GEDLRAAPLA HRRARLEAVL AALPPGLPIA PSPLVSFDDW
ETLGQIRATA RARIAEGLML KRASSPYFVG RKRGDWWKWK LDPYTVDAVM LYAQQGAGRR
ATLFTDFTFG VRDGDDLVPF TKAYSGLTDA EFRQITDWVR KNTLERFGPV RRVPPELVFE
LAFEGIQASP RHKSGIALRF PRMVRWRKDK PAAEIDTLES LRALLASTGA AP
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