| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1543 |
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| Symbol | |
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| ID | 5084267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1581708 |
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| End bp | 1582703 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640483102 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001167742 |
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| Protein GI | 146277583 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAT GGAAGCTCTG CGCCACCGCG CTGATGCTGG TGCTTGCGCC CATCGGGATG
GCGCAGGCGC AGGTGGTGCT GAAGCTCGCC TCGAACGCGG TGCGCAGCGA CCCGCCGCGG
GTGGGCGACC AGATCGCCTT CGAATGGCTG CAGTCGGAAC TCGAGAGCCG GACGAACGGC
GAGGTGACGC TCGAGATCTA CTGGGGCGGC GCGCTCGGCG CCGAGGCGCA GCTTGTCCAG
TCGCTCGAGA CCGGGGTGAT CGACATCCTG CCGAATTCCG GCTCGAACGC CGCCTCGACC
CTGCCCGAGG CGGGGCTCTT CAGCACAAGC TACCTGTTCC GCGACTTCGA CCATTACCGC
GCGGTGGCCA ACGATCCCGC CTTCTTCGAC CGGCTGGCCG AGCTTCAGGC GGCCCGCAAC
GCGGGCTACC GGCTGGTGGG GCTGGGGGCG ACGGGCTCGC GCAACCTCTA CAACCGCACC
CGTCCGGTGG CGACACCCGA GGAGGCGGCC GGGTTGAAGA TGCGTGTCCA GTCCAGCCCG
ATCGAGTTCC GCATCTGGCA GACGCTGGGC CTGATCCCGA CCGCCATCCC CTCGACCGAG
ATCTACCTGT CGCTGCAGAC CGGCGTGGTC GATGCCTCGG AAAGCTCGAT CCCCTTCATC
ATGTCGAACA AGTATTACGA GGTGGCGCCC TACATCACGC TGACCAATCA CCAGATCAGC
ACGCATCTCT ATTTCCTGAA CGACGCCTCG CTTCAGCGCG TGCCCGAGGA GCATCGGCAG
GTGCTGCTCG GCCTGCTGCG CGAGACCGGG AACCGGCACA TCGATGCGAC GGCAGACCTC
AGCGAGACGA TGCTCGAGGA GCTGCGCGCC CAGCCCGGCG TGACCGTCAC CGAGGCCGAC
ACCAAGGCCT TCGCGAACCG TCTGGTGGAG CTTCAGGACG AGGCGGCGGC CGAGCTGGGC
GTGACGGACC TGCTCGCCAC CATCCGCGCG CATTGA
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| Protein sequence | MKTWKLCATA LMLVLAPIGM AQAQVVLKLA SNAVRSDPPR VGDQIAFEWL QSELESRTNG
EVTLEIYWGG ALGAEAQLVQ SLETGVIDIL PNSGSNAAST LPEAGLFSTS YLFRDFDHYR
AVANDPAFFD RLAELQAARN AGYRLVGLGA TGSRNLYNRT RPVATPEEAA GLKMRVQSSP
IEFRIWQTLG LIPTAIPSTE IYLSLQTGVV DASESSIPFI MSNKYYEVAP YITLTNHQIS
THLYFLNDAS LQRVPEEHRQ VLLGLLRETG NRHIDATADL SETMLEELRA QPGVTVTEAD
TKAFANRLVE LQDEAAAELG VTDLLATIRA H
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