Gene Rsph17025_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1385 
Symbol 
ID5083059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1414243 
End bp1414995 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content73% 
IMG OID640482943 
ProductABC transporter related 
Protein accessionYP_001167587 
Protein GI146277428 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.193672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC TTTCCCTGAC GGACCTGACG GTGCGGCGCG GCGAGTGTCC GGTGGTGGAT 
CATGTGACGC TGCAGGTCGC GCCGGGTGAG TTCGTCGGGC TCATCGGCCC GAATGGGGCC
GGCAAGACCA CGCTTCTGCG CGCGGCGATG GGCCTTCTGC CGGCTTCGGG CGACAGCAGC
CTCGCGGCCC TTCCGCCACG GGCGCGCGCG CGGGCGGCCG CCTTCCTGCC GCAGGCGCGC
GAGATCGCCT GGCCCGTCGA TGTCGAGACG CTGGTGACGC TGGGCCGCGT GCCCCACATG
GGGCGCAAGC TGACGCCGGC CGACCGCGAG GCGGTGACGC GTGCGCTGGG GCGGATGGGA
CTTTCGGGCT ACCGTGAGCG CATCGCCACG GCCCTTTCGG GAGGGGAGCA GGCGCGGGTG
CTGATCGCCC GTGCGCTGGC GCAGGAGGCG CCGCTGCTCC TGGCGGACGA GCCGGTGGCG
GGCCTCGATC CCGAGAGCCA GATCCGCGCC ATGCAGGTCT TCGGCGACCT GGCCGCCGAG
GGGCGGGCGG TGGTGGCCTC GATCCATGAT CTGGGGCTTG CAGCGCGGCA CTGCACGCGG
CTTCTTCTGA TGGCGCGGGG GCGCATCGTG GCGGACGGCT CTCCGGGGCT CGTGCTGACG
GCGGCCAATC TCTCGGACGT GTTCGGGGTC CGCGCCTTCT TCGCCGACAC GCCGGACGGG
CCGGTGTTCC AGCCGCTGGG CGTCACGCGG TGA
 
Protein sequence
MSLLSLTDLT VRRGECPVVD HVTLQVAPGE FVGLIGPNGA GKTTLLRAAM GLLPASGDSS 
LAALPPRARA RAAAFLPQAR EIAWPVDVET LVTLGRVPHM GRKLTPADRE AVTRALGRMG
LSGYRERIAT ALSGGEQARV LIARALAQEA PLLLADEPVA GLDPESQIRA MQVFGDLAAE
GRAVVASIHD LGLAARHCTR LLLMARGRIV ADGSPGLVLT AANLSDVFGV RAFFADTPDG
PVFQPLGVTR