| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1201 |
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| Symbol | |
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| ID | 5084485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1243317 |
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| End bp | 1245035 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640482759 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001167407 |
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| Protein GI | 146277248 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.487559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.842714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATACG GCACGACAGC CATGGCGCTG GCGCTGATGG CGCTGGGGGC ACCGGCCTTC
GCCGACATCG AGGCTGCGCG GCAGTTCCTC GATGCCGAGA TCGGCGACAT GTCCTCGCTC
ACGCGCGAGG AGCAGGAAGC CGAGATGCAA TGGTTCATCG ACGCGGCGCA GCCCTTCGCC
GGCATGGACA TCAAGGTGGT CTCGGAGACC ATCACCACGC ATGAATATGA ATCCAAGGTG
CTGGCGCCCG CCTTCACCGC GATCACGGGC ATCCGGGTCA GCCACGACCT GATCGGCGAA
GGCGACGTGG TCGAGAAGCT GCAGACGCAG ATGCAGTCGG GCGAGAACAT CTATGACGCC
TACATCAACG ACAGCGACCT GATCGGCACC CACTGGCGCT ACCAGCAGGC CCGCAGCCTG
ACCGACTGGA TGGCGAACGA GGGCCAGGAC GTCACCAACC CCGGCCTCGA TCTCGACGAT
TACATCGGCC TGAAGTTCAC CACCGCACCG GATGGCGAGC TTTACCAGCT GCCCGACCAG
CAGTTCGCCA ACCTCTACTG GTTCCGCGCC GACTGGTTCG ACGATCCAGA GACCAAGGCC
GACTTCCAGG AGAAGTACGG CTACGAGCTG GGCGTGCCGC TGAACTGGTC GGCCTACGAG
GACATCGCCG AGTTCTTCAC GGGGCGCGAC ATGAGCGCGC TCGGCGGGCC GACGAGCGCC
TATGGCAGCA TGGATTACGG CAAGAAGGAC CCGAGCCTCG GCTGGCGCTA CACCGACGCC
TGGATGTCGA TGGCGGGCAT GGGCGACAAG GGCGATCCGA ACGGTCTGCC GGTCGATGAA
TGGGGCATCC GGGTGGACGA GAACTCGCGC CCCGTGGGCT CCTGCGTGGC GCGCGGCGGC
GCGACCAACG ACGCGGCGGC GGTCTATGCG ATCACCAAGG CGATCGAATG GCTGCAGAAA
TACGCCCCGC CGCAGGCCGC CGGCATGACC TTCTCGGAAT CCGGGCCGGT GCCCGCGCAG
GGCGAGGTCG CCCAGCAGAT CTTCTGGTAC ACCGCTTTCA CCGCCGACAT GGTCAAGGAG
GGCCTGCCGG TGATGAACGA GGATGGCACG CCCAAGTGGC GCATGGCCCC CTCGCCGCAT
GGCGCCTACT GGACCGAAGG CACCAAGGTC GGCTACCAGG ACGTGGGCTC GTGGACGCTG
CTGAAATCCA CCCCCGACGA CCGCGCCAAG GCCGCCTGGC TCTACGCCCA GTTCGTCTCG
TCCAAGACCG TGGACGTGAA GAAGAGCCAC GTCGGCCTGA CCTTCGTGCG CGAATCCACC
ATCCAGCACC AGAGCTTCAC CGACCGCGCG CCCAATCTTG GCGGTCTGGT CGAGTTCTAC
CGCTCGCCCG CCCGCGTCCA GTGGTCGCCC ACGGGGACGA ACGTGCCGGA TTACCCGAAG
CTCGCGCAGC TCTGGTGGCA GAACATCGGC GATGCGATGT CGGGCGCCAA GTCGCCGCAG
GAGGCTCTGG ACGCGCTCTG CGCCGAGCAG GAGCGGGTGC TGGCGCGGCT GGAACGGGCC
GGCGTGCAGG GTGATCTCGG GCCGAAGCTG AACGAGGAGA AGGACCCGCA GGAATGGCTC
GACGCGCCCG GCGCGCCGGT GGGCAAGCTC GAGAACGAGA AACCCGCGGG TGAGACGATC
CCCTACGACG AACTCATCAA GTCCTGGCAG CAGGGCTGA
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| Protein sequence | MRYGTTAMAL ALMALGAPAF ADIEAARQFL DAEIGDMSSL TREEQEAEMQ WFIDAAQPFA
GMDIKVVSET ITTHEYESKV LAPAFTAITG IRVSHDLIGE GDVVEKLQTQ MQSGENIYDA
YINDSDLIGT HWRYQQARSL TDWMANEGQD VTNPGLDLDD YIGLKFTTAP DGELYQLPDQ
QFANLYWFRA DWFDDPETKA DFQEKYGYEL GVPLNWSAYE DIAEFFTGRD MSALGGPTSA
YGSMDYGKKD PSLGWRYTDA WMSMAGMGDK GDPNGLPVDE WGIRVDENSR PVGSCVARGG
ATNDAAAVYA ITKAIEWLQK YAPPQAAGMT FSESGPVPAQ GEVAQQIFWY TAFTADMVKE
GLPVMNEDGT PKWRMAPSPH GAYWTEGTKV GYQDVGSWTL LKSTPDDRAK AAWLYAQFVS
SKTVDVKKSH VGLTFVREST IQHQSFTDRA PNLGGLVEFY RSPARVQWSP TGTNVPDYPK
LAQLWWQNIG DAMSGAKSPQ EALDALCAEQ ERVLARLERA GVQGDLGPKL NEEKDPQEWL
DAPGAPVGKL ENEKPAGETI PYDELIKSWQ QG
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