Gene Rsph17025_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1194 
Symbol 
ID5084478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1236531 
End bp1236992 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content71% 
IMG OID640482752 
Productthioesterase superfamily protein 
Protein accessionYP_001167400 
Protein GI146277241 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.149341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.623252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGC CGTCCTCATC CGCCCTTGAT CGCGTCCGCG CCAGCTTTGC CCGGCAGGCT 
GCCATGGATC TCATCCGCGC CACCCTTCCG CTGGTGGAGC CGGGGCGGAC CGAGATCCAC
CTGCCGCACT GGGACGGGAT CGAGCAGCAG CACGGCTTCA TCCACGGGGG CGTGGTCGGC
ATGATCGCGG ACTCGGCCGC GGGCTATGCG GCCATGACGC TGGTGCCGGC CGATGCCTCG
GTCCTGACGG TGGAATACAA GATGAACCTG ATGGCGCCGG CCGATGGCCA CGGGCTGATC
GCGCGGGGCG AGGTGGTGCG CGCGGGCCGG ACGCTGATCG TGACGCGGGC CGAGGTGGTG
GCGCTGCGCG ATGGGGCCGA ACAGGCCTGC GCCCTCATGC AGCAGACGAT CATGGTGATG
CGCCATCGGG GCGAGAAGCG GGAGTCCGGC GTCGGCGGCT GA
 
Protein sequence
MAEPSSSALD RVRASFARQA AMDLIRATLP LVEPGRTEIH LPHWDGIEQQ HGFIHGGVVG 
MIADSAAGYA AMTLVPADAS VLTVEYKMNL MAPADGHGLI ARGEVVRAGR TLIVTRAEVV
ALRDGAEQAC ALMQQTIMVM RHRGEKRESG VGG