Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1136 |
Symbol | |
ID | 5084568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1166447 |
End bp | 1168561 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640482694 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_001167342 |
Protein GI | 146277183 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.55158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGCCG CGCCGCAGCC CGCGGGGCTG CCGGGACTTG CCACCGCGCC CGGGCGCCCC TGGCCGCTGG GCGCGAGCTT TGACGGTGAG GGCGTCAATT TCGCCCTGTT CTCGGCCCAT GCCGAGAGGG TGGAGCTGTG CCTCTTTGCG CCGGACGGGC GGCGCGAGCT GATGCGCCTG CCGCTGACCG AGCGCGACGG GGACATCTGG CACCTGAAGG TGAACGGCCT TCTGCCGGGG CAGCTGTACG GCTACCGCGT CCACGGCCCC TACCTGCCCG AGCAGGGCCA CAGGTTCAAT CCCAACAAGC TGCTGATCGA TCCCTATGCC CGCAGGCTCG AGGGGCGGCT GCGCTGGTCG GATGCGGTGA TGGGCTACAA GGTCGGCAGC CCGCGGGGCG ATCTCTCCTT CGACAACCGC GACAGCGCCT TCGCGGTGCC GAAGTCGGTC GTGGTGGGGC ACAATTTCAA CTGGGGCCCC GACGCCCCGC CCGAGCGGGC GCTGACCGAG ACCCTGATCT ACGAGGCCCA TGTCAAGGGG CTGACCATGC TGCATCCCGG CGTGGAGGAG GGGTTGCGGG GCACTTTCCT CGGCCTCGCC TCGGATGCGG TCGTCGAGCA TCTGCTGCGG CTCGGGGTGA CGGCGGTCGA GCTGCTGCCG GTGCAGGCCT TTCTCGACGA CCGCTTTCTC GTGAACCGGG GGCTTTCGAA CTACTGGGGC TACCAGACCA TCGGCTTCTT CGCGCCCGAC CCGCGCTATC TGGCCAAGGG GGCGCTGTGG GAGTTCGCGG CGATGGTGCG GCGCTTCCAT GCCGCGGGCA TCGAGGTCAT CCTCGACGTG GTCTACAACC ACACCGGCGA GAGCGACGAG CTGGGGCCCA CGCTGGCCTT CCGGGGGATC GACAACCGCA GCTACTACCG GCTGGCCGAG GGCGGGCGGC GCTATGTCAA CATGACCGGC ACGGGGAACA CGCTCGATCT CAGTCACCCT ATGGTGCTGC GGATGGTGAT GGACAGCTTG CGCTACTGGG TCGAGGTCAT GCATGTGGAC GGCTTCCGCT TCGATCTGGC CTCGGTGCTG GGGCGCGAGG AGGATGCGTT CGACGACCGG GGCGCCTTCT TCGATGCGAT CCGGCAGGAT CCGGTGCTCA CGCGGGTCAA GCTGATCGCC GAGCCCTGGG ATCTTGGGCC GGGCGGCTAC CGGCTGGGGG GCTTTCCCCA TCCGTTCCTC GAATGGAACG ACAAGTTCCG CGACGATGTC CGGCGCTTCT GGCGCGGCGA TGCGGGCATG ACGGGCGATC TCGCGCGGCG GCTGCTGGGA TCGGCCGAGC GGTTCGACCA CCAGTCGCGC GCGGCCACCA GCTCGGTCAA CTTCCTGACG GCGCATGACG GATTCACGCT GGCCGATCTG GTGAGCCATG CGCGCAAGCA CAACGAGGCC AACGGCGAAG AGAACCGCGA CGGCCACGAC GACAATCACT CGGACAATCT GGGCCTTGAG GGGCCGACCT CCGACCCCGC GATCCAGGCG GCCCGTGCGC TGCGCCGGCG CAACCTTCTG GCGACGCTGT TTCTCAGCCA GGGGACGCCG ATGCTCTTGG GCGGGGACGA GATCGGCAAT TCGCAGGGCG GCAACAACAA CGCCTATGCG CAGGACAATC CGGTGGGCTG GGTGAACTGG GACCGGCCCG ACGAGGCGAT CCTCGCCTTC GTCGAGCGGA TCTCGGCCCT GCGGCGGAGC CTGCCGGTCC TGCGGCAGAA GGGCTTTCTG CACGGGCGCC GACGGGAGGC GGACGGGATG CGGGACGTGA TCTGGCGTCT GCCCGACGGG CGCGAGCCGG GGCCGCATGA CTGGCACTCG GCCGAGGTGC GCTGCCTCTG CGTCGAGCTG CGGATGGACG CCGACCGGCC CGACTCCGGC GAGAGCCCGG TGCTGGCCGT CTTCAATGCC GGAGAGGCCG TGCCGCTGGC CTTGCCGCCG CTTGCCGGGG GCTGGCATCT TGTCCTCGAC ACGACGCGGC CCGAGGCCCC TTCCGAACCC GTGAGTCCGG GGCTTGCAGC TCCGGCCCGA TCCGTGCTGG TCTTCGTGCC GGCGCCAACT GGAGAGACTG GATGA
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Protein sequence | MTAAPQPAGL PGLATAPGRP WPLGASFDGE GVNFALFSAH AERVELCLFA PDGRRELMRL PLTERDGDIW HLKVNGLLPG QLYGYRVHGP YLPEQGHRFN PNKLLIDPYA RRLEGRLRWS DAVMGYKVGS PRGDLSFDNR DSAFAVPKSV VVGHNFNWGP DAPPERALTE TLIYEAHVKG LTMLHPGVEE GLRGTFLGLA SDAVVEHLLR LGVTAVELLP VQAFLDDRFL VNRGLSNYWG YQTIGFFAPD PRYLAKGALW EFAAMVRRFH AAGIEVILDV VYNHTGESDE LGPTLAFRGI DNRSYYRLAE GGRRYVNMTG TGNTLDLSHP MVLRMVMDSL RYWVEVMHVD GFRFDLASVL GREEDAFDDR GAFFDAIRQD PVLTRVKLIA EPWDLGPGGY RLGGFPHPFL EWNDKFRDDV RRFWRGDAGM TGDLARRLLG SAERFDHQSR AATSSVNFLT AHDGFTLADL VSHARKHNEA NGEENRDGHD DNHSDNLGLE GPTSDPAIQA ARALRRRNLL ATLFLSQGTP MLLGGDEIGN SQGGNNNAYA QDNPVGWVNW DRPDEAILAF VERISALRRS LPVLRQKGFL HGRRREADGM RDVIWRLPDG REPGPHDWHS AEVRCLCVEL RMDADRPDSG ESPVLAVFNA GEAVPLALPP LAGGWHLVLD TTRPEAPSEP VSPGLAAPAR SVLVFVPAPT GETG
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