| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1098 |
|---|
| Symbol | |
|---|
| ID | 5084701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 1123756 |
|---|
| End bp | 1124265 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640482656 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
|---|
| Protein accession | YP_001167304 |
|---|
| Protein GI | 146277145 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0363863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGA TCAAGGACCC CGAGAACACC ATCATCATGA CGCTGAAGGA CGGCGAGGTG
GTGATCGAGC TTCTCCCGGA CGTCGCGCCG AAGCACAGCG AGCGGATGAA GGCGCTGGCC
CGCGCCAAGG CCTACGACAA TGTCGTGTTC CATCGCGTGA TCGAAGGCTT CATGGCCCAG
ACCGGCGATG TGGCCAACGG CAACACCGAA AACAACTTCA GCATCCGCCG CGCCGGGACC
GGCGGGTCGG ACATGCCCGA CCTTCCGGCG GAATTCTCGA AACTGCCCCA TGCGCGCGGC
ACCCTCGGCG CCGCCCGGTC GCAGAACCCG AACTCGGCCA ACTCGCAGTT CTTCATCAAC
TTCCGCGACA ACGATTTCCT GAACGGCCAA TACACCGTCT ATGGCCGCGT GATCTCGGGG
ATGGAGCATG TGGACAAGAT CGTCCGGGGC GAGCCGCCGG CGAACCCGGA CAAGATGCTG
ACGGTGCGGG TGGCCGCCGA TGTCGTCTGA
|
|---|
| Protein sequence | MAEIKDPENT IIMTLKDGEV VIELLPDVAP KHSERMKALA RAKAYDNVVF HRVIEGFMAQ
TGDVANGNTE NNFSIRRAGT GGSDMPDLPA EFSKLPHARG TLGAARSQNP NSANSQFFIN
FRDNDFLNGQ YTVYGRVISG MEHVDKIVRG EPPANPDKML TVRVAADVV
|
|---|
| |