Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1089 |
Symbol | |
ID | 5084692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1111764 |
End bp | 1115657 |
Gene Length | 3894 bp |
Protein Length | 1297 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640482647 |
Product | hypothetical protein |
Protein accession | YP_001167295 |
Protein GI | 146277136 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.466235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0337105 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGC TTTTGCTTGC GGCGGCGGGA TCGGCGATCG GGGCAGGCTT TGGCGGCACG GTGCTGGGGC TGACCGGCGC GGTGATCGGC CGCGCGATCG GGGCGACGGT CGGGCAGATG ATCGATCAGC GCCTGATGGG CGCCGGATCG CAGACCGTGC GCACCGGGCG GATCGAGCGT TTCCGCCTGA TGGGTGCGGG CGAGGGCGCC GCGGTGGCGC AGATCTTCGG CCGGAACCGG GTTGCGGGGC AGGTGATCTG GGCCTCGCGC TTTCTCGAGA GCCAGTCCGA GAGTTCGAGC GGTGGGAAAG GCGGCGGTCC CCGGACCACC GTGGTCAGCT ACTCCTACTC GGTGAGCCTC GCCGTCGCGC TGTGCGAGGG CGAGATCCTG CGCGTGGGGC GGATCTGGGC GGACGGGGCC GAGATCGCGC CGGACACGCT TAATCTTCGC CTCTATCGAG GGACGGAGGA TCAGCTTCCC GATCCGAAGA TCGAAGCGGT GGAGGGGGCC GGTCGGGCCC CTGCCTACCG CGGCATCGCC TATGCGGTCA TTGAGGATCT GCAACTCGAA CCCTTCGGGA ACCGGGTGCC ACAGTTCTCC TTCGAGGTCA TGCGTGCCGC GCAGGGCCCC CTGGCGGACC GGGTGACGAA CCTGCAGCGC GCGGTGAGGG GCGTGGCGAT GATCCCCGGC TCTGGCGAGT ATGCGCTGGC CACGAGCCGT CTCGCCTACA ATTACGGACC GGGCGAAAGC GAAACCGCCA ATGTGCACAC GGCCTCCGGG CAGAGCGACT TTCTCACCTC GCTCGATCAG CTGAGGGGCG AACTGCCCGC CTGTCGCTCG GTCTCGCTGG TGGTCTCGTG GTTCGGAAGC GACCTGCGCT GTGGCGAGTG CGAGATCCGG CCGAAGGTGG AGCAGGGCAG CTTTGACGCC TCGAAGATGG CGTGGCGCGC GGGTGGGATT GATCGGGGCG GCGCGCAGCT GGTGGGCCGG CTGGAGGACC GCCCGGCCTA TGGAGGCACG CCTGCGGATG CGGCGGTGAT CGAGGCCATC CGCGCCCTTC ACGTGGCGGG CCGGTCGGTG GTCTATTATC CCTTCATCCT GATGGAGCAG TTGCCCGGCA ATGCGCTGCC GAACCCCTGG ACGGGTGAGA CGGGGCAGCC GGTGCTTCCC TGGCGCGGTC GCATTACCTT GTCGGCGGCC CCTGGCCGTG CCGGAAGCCC GGACCGCACC GCGGCCGCCG TGGCCGAGGT GGCGGCCTTC TTCGGCACCG GCGAGCCGGA TCAGTTCCGC ATCGAAGGCG ACCGCATCCT CTACGACGGG CCGGACGAGT GGCGCTATCG GCGGTTCATC CTTCATGCGG CCTGGCTCTG CCGGCTGGCG GGGGGCGTCA GTGCCTTCTG CATCGGGTCG GAGATGCGCG GACTGACCCA GATCCGCGCA AGCGGCGACA GCTTTCCGGC CGTGGCCGAA CTGCGCAGGC TCGCCGCGGA CGTGCGCTCG ATCCTGGGCC CGTCGGTGAA GATCGGCTAT GCCGCCGACT GGTCGGAATG GTTCGGCTAC CACCCGGAGG GCGACGTTCA TTTTCATCTC GACCCGCTCT GGGCGGACGA GAACATCGAT TTCATCGGCA TCGACAACTA CATGCCGCTG TCGGACTGGC GGCCGGGGGA GGATCATGCG GATGCGCATT GGGATTCGGT CCATGAGCTC GACTATCTGA AGGCCAACGT CGCCGGGGGC GAGGGCCATG ACTGGTACTA CCGCGATGAA GCAGGAGCGG CTGCGCAGGA TCGAGTGCCC ATCACGGACG GCGCCTTCGG AGAGCCCTGG GTCTATCGCT GCAAGGATCT GAAGAGCTGG TGGTCGCTTC CACATCACGA CAGGATCGCA GGCGCCCGGA AAGCGCAGCC CACGGCTTGG GTGCCGCGCT CGAAGCCGAT CTGGTTCACG GAATATGGCT GCCCCGCGCT CGATCTGGGC ACAAACCAGC CCAACCTGTT CCTTGACCCA AAAAGCTCGG AGTTGTCGCT TCCCCGGGGG TCTTCCGGGC GGCGCGATGA CGTCATCGGG ATGGATTACC TAAGGGCCAT GGCCGAATAC TGGGCCGACG AGGCGAACAA CCCGGTCTCA CCGCGTTATG GCGGGCGGAT GGTGGACATG GACCGTGCCC ATGTCTGGGC CTGGGACGCG CGCCCGTTTC CCGCCTTTCC GGCCCGCGCC GATGTCTGGA GCGATGGGGA CAATTACGCC CGCGGTCACT GGTTGAACGG GCGCGCCGCC TCGCAACCCC TCGCGGCGGT GGTGGCCGAG ATCTGCGAGC GGTCGGGTGT GACCGCCATC GACGTTTCCC GCCTTCATGG TGTCGTGCGG GGCTATGGGC TGGCTGAGGT GGATACGGCG CGCGCAGCCC TCCAGCCGCT GATGCTGGCC TACGGGTTCG AGGCGCTGGA GCGGGACGGG ATGCTGGTCT TCCGCATGCG GGACGGACGC AGGAGCGTCG AGGTCAGGCG TGAGGGGCTC GTGCAGTCGG ACGAACTGGA CGGGGCGGTG GAACTGATCC GCGCCGCCGA GGTGGAGACG GTCGGGCGGG TCCGTCTGGG TTTCCTCGAG GCTGAAGGCG ACTATGAGGC GCGGCAGGTC GAGGCCGCCT TCCCGGACGA GGCGACCTTT GCGGTCTCGC AGTCCGAGGT TCCGCTGGTC CTGACGTCGG CCGAGGCGCG GGGGACGGTC GAGCGGTGGC TGGCCGAGTC GCGGGTGGCG CGGGACAGTC TGCGGCTTGC GCTGCCGCGG TCGGCACTGG CGCTCGGGGC AGGGGATGTG CTCGAACTGG AGGGGCGGCG CTATCGCATC GACCGGCTGG AGCAGGCCGA GGCGCAGCTT GCCGAAGCGG TCCGGGTGGA GCCGGGCATC TACATACCCG CCGACATCGC AGAGCAGCGG CCGCCTGCGC GCAAGGTCGC GGCGCAAATG CCGGTGCACG CCGTCATCCT CGATCTGCCG CTGATGACCG GGGCCGAGGT CGCGCATGAG CCGCATCTGG CCGTCACGGC CGCGCCCTGG CCGGGACGGG TTGCGGTCTG GAGCGCGATG CAGGACGCCG GATACCGGCT GAACGGTCTC GTCACCGGAG CGGCGACGCT TGGCGTGACG CAGACACCGC TTCGGGCCGC GCCGGCCGGT CGGTGGGACA TGGGGGCGGC CCTGCGGGTG AAGCTGCAGG GGCCGCCTCT TGCGTCGGCC TCCGATCTCG AGGTGCTGAA CGGCGCCAAT GTGATGGCCA TCGGCGACGG CTCGGTGGAT GGCTGGGAAC TGTTCCAGTT CGCCGAGGCG CGTCTCGTCG GTCCCAGGAC GTGGGATCTC ACGCGAAGGC TGCGGGGGCA GGCCGGGACG GATGCGACGA TGCCGGAGGT CTGGCCCTCG GGAAGCACGG TGGTGCTGAT CACCCCGGCC CTCGTGCAAC TCGGGGTGCC GCTCGCCGAG CGCAACCTCG CCCGGCACTA CCGGATTGGC GCTGCGGCGC GTGGATATGA TGATGCGGAT GTGATCCACC GCGTTGACGC CTGTGCCGGC GTGGGCCTGC GCCCGCTCGC TCCTGTGCAT CTCGCGGCCG AGCGGCGCGA CGGCGATCTG CTCGTGCGCT GGGTGCGGCG CACGCGGATT GACGGGGACA GCTGGGAAGG GCGCGAAGTG CCTCTGGGGG AGGGGAGCGA ACTCTATCTG GTGCGGGTCC GCATGAACGG GCTGGTGGGA CGGCAGGAGG AAGTAACGGC GCCGTGCTGG ACCTACACGG CGGAGGCGCA GGCGGAGGAT GGTGCGGCAG GCACCTTTAC TGTCGAAGTG GCACAAGTCT CGGACAGCTT CGGACCCGGC CCGTTCCGGC GCCTTATGGT CTGA
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Protein sequence | MATLLLAAAG SAIGAGFGGT VLGLTGAVIG RAIGATVGQM IDQRLMGAGS QTVRTGRIER FRLMGAGEGA AVAQIFGRNR VAGQVIWASR FLESQSESSS GGKGGGPRTT VVSYSYSVSL AVALCEGEIL RVGRIWADGA EIAPDTLNLR LYRGTEDQLP DPKIEAVEGA GRAPAYRGIA YAVIEDLQLE PFGNRVPQFS FEVMRAAQGP LADRVTNLQR AVRGVAMIPG SGEYALATSR LAYNYGPGES ETANVHTASG QSDFLTSLDQ LRGELPACRS VSLVVSWFGS DLRCGECEIR PKVEQGSFDA SKMAWRAGGI DRGGAQLVGR LEDRPAYGGT PADAAVIEAI RALHVAGRSV VYYPFILMEQ LPGNALPNPW TGETGQPVLP WRGRITLSAA PGRAGSPDRT AAAVAEVAAF FGTGEPDQFR IEGDRILYDG PDEWRYRRFI LHAAWLCRLA GGVSAFCIGS EMRGLTQIRA SGDSFPAVAE LRRLAADVRS ILGPSVKIGY AADWSEWFGY HPEGDVHFHL DPLWADENID FIGIDNYMPL SDWRPGEDHA DAHWDSVHEL DYLKANVAGG EGHDWYYRDE AGAAAQDRVP ITDGAFGEPW VYRCKDLKSW WSLPHHDRIA GARKAQPTAW VPRSKPIWFT EYGCPALDLG TNQPNLFLDP KSSELSLPRG SSGRRDDVIG MDYLRAMAEY WADEANNPVS PRYGGRMVDM DRAHVWAWDA RPFPAFPARA DVWSDGDNYA RGHWLNGRAA SQPLAAVVAE ICERSGVTAI DVSRLHGVVR GYGLAEVDTA RAALQPLMLA YGFEALERDG MLVFRMRDGR RSVEVRREGL VQSDELDGAV ELIRAAEVET VGRVRLGFLE AEGDYEARQV EAAFPDEATF AVSQSEVPLV LTSAEARGTV ERWLAESRVA RDSLRLALPR SALALGAGDV LELEGRRYRI DRLEQAEAQL AEAVRVEPGI YIPADIAEQR PPARKVAAQM PVHAVILDLP LMTGAEVAHE PHLAVTAAPW PGRVAVWSAM QDAGYRLNGL VTGAATLGVT QTPLRAAPAG RWDMGAALRV KLQGPPLASA SDLEVLNGAN VMAIGDGSVD GWELFQFAEA RLVGPRTWDL TRRLRGQAGT DATMPEVWPS GSTVVLITPA LVQLGVPLAE RNLARHYRIG AAARGYDDAD VIHRVDACAG VGLRPLAPVH LAAERRDGDL LVRWVRRTRI DGDSWEGREV PLGEGSELYL VRVRMNGLVG RQEEVTAPCW TYTAEAQAED GAAGTFTVEV AQVSDSFGPG PFRRLMV
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