Gene Rsph17025_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1089 
Symbol 
ID5084692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1111764 
End bp1115657 
Gene Length3894 bp 
Protein Length1297 aa 
Translation table11 
GC content69% 
IMG OID640482647 
Producthypothetical protein 
Protein accessionYP_001167295 
Protein GI146277136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.466235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0337105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGC TTTTGCTTGC GGCGGCGGGA TCGGCGATCG GGGCAGGCTT TGGCGGCACG 
GTGCTGGGGC TGACCGGCGC GGTGATCGGC CGCGCGATCG GGGCGACGGT CGGGCAGATG
ATCGATCAGC GCCTGATGGG CGCCGGATCG CAGACCGTGC GCACCGGGCG GATCGAGCGT
TTCCGCCTGA TGGGTGCGGG CGAGGGCGCC GCGGTGGCGC AGATCTTCGG CCGGAACCGG
GTTGCGGGGC AGGTGATCTG GGCCTCGCGC TTTCTCGAGA GCCAGTCCGA GAGTTCGAGC
GGTGGGAAAG GCGGCGGTCC CCGGACCACC GTGGTCAGCT ACTCCTACTC GGTGAGCCTC
GCCGTCGCGC TGTGCGAGGG CGAGATCCTG CGCGTGGGGC GGATCTGGGC GGACGGGGCC
GAGATCGCGC CGGACACGCT TAATCTTCGC CTCTATCGAG GGACGGAGGA TCAGCTTCCC
GATCCGAAGA TCGAAGCGGT GGAGGGGGCC GGTCGGGCCC CTGCCTACCG CGGCATCGCC
TATGCGGTCA TTGAGGATCT GCAACTCGAA CCCTTCGGGA ACCGGGTGCC ACAGTTCTCC
TTCGAGGTCA TGCGTGCCGC GCAGGGCCCC CTGGCGGACC GGGTGACGAA CCTGCAGCGC
GCGGTGAGGG GCGTGGCGAT GATCCCCGGC TCTGGCGAGT ATGCGCTGGC CACGAGCCGT
CTCGCCTACA ATTACGGACC GGGCGAAAGC GAAACCGCCA ATGTGCACAC GGCCTCCGGG
CAGAGCGACT TTCTCACCTC GCTCGATCAG CTGAGGGGCG AACTGCCCGC CTGTCGCTCG
GTCTCGCTGG TGGTCTCGTG GTTCGGAAGC GACCTGCGCT GTGGCGAGTG CGAGATCCGG
CCGAAGGTGG AGCAGGGCAG CTTTGACGCC TCGAAGATGG CGTGGCGCGC GGGTGGGATT
GATCGGGGCG GCGCGCAGCT GGTGGGCCGG CTGGAGGACC GCCCGGCCTA TGGAGGCACG
CCTGCGGATG CGGCGGTGAT CGAGGCCATC CGCGCCCTTC ACGTGGCGGG CCGGTCGGTG
GTCTATTATC CCTTCATCCT GATGGAGCAG TTGCCCGGCA ATGCGCTGCC GAACCCCTGG
ACGGGTGAGA CGGGGCAGCC GGTGCTTCCC TGGCGCGGTC GCATTACCTT GTCGGCGGCC
CCTGGCCGTG CCGGAAGCCC GGACCGCACC GCGGCCGCCG TGGCCGAGGT GGCGGCCTTC
TTCGGCACCG GCGAGCCGGA TCAGTTCCGC ATCGAAGGCG ACCGCATCCT CTACGACGGG
CCGGACGAGT GGCGCTATCG GCGGTTCATC CTTCATGCGG CCTGGCTCTG CCGGCTGGCG
GGGGGCGTCA GTGCCTTCTG CATCGGGTCG GAGATGCGCG GACTGACCCA GATCCGCGCA
AGCGGCGACA GCTTTCCGGC CGTGGCCGAA CTGCGCAGGC TCGCCGCGGA CGTGCGCTCG
ATCCTGGGCC CGTCGGTGAA GATCGGCTAT GCCGCCGACT GGTCGGAATG GTTCGGCTAC
CACCCGGAGG GCGACGTTCA TTTTCATCTC GACCCGCTCT GGGCGGACGA GAACATCGAT
TTCATCGGCA TCGACAACTA CATGCCGCTG TCGGACTGGC GGCCGGGGGA GGATCATGCG
GATGCGCATT GGGATTCGGT CCATGAGCTC GACTATCTGA AGGCCAACGT CGCCGGGGGC
GAGGGCCATG ACTGGTACTA CCGCGATGAA GCAGGAGCGG CTGCGCAGGA TCGAGTGCCC
ATCACGGACG GCGCCTTCGG AGAGCCCTGG GTCTATCGCT GCAAGGATCT GAAGAGCTGG
TGGTCGCTTC CACATCACGA CAGGATCGCA GGCGCCCGGA AAGCGCAGCC CACGGCTTGG
GTGCCGCGCT CGAAGCCGAT CTGGTTCACG GAATATGGCT GCCCCGCGCT CGATCTGGGC
ACAAACCAGC CCAACCTGTT CCTTGACCCA AAAAGCTCGG AGTTGTCGCT TCCCCGGGGG
TCTTCCGGGC GGCGCGATGA CGTCATCGGG ATGGATTACC TAAGGGCCAT GGCCGAATAC
TGGGCCGACG AGGCGAACAA CCCGGTCTCA CCGCGTTATG GCGGGCGGAT GGTGGACATG
GACCGTGCCC ATGTCTGGGC CTGGGACGCG CGCCCGTTTC CCGCCTTTCC GGCCCGCGCC
GATGTCTGGA GCGATGGGGA CAATTACGCC CGCGGTCACT GGTTGAACGG GCGCGCCGCC
TCGCAACCCC TCGCGGCGGT GGTGGCCGAG ATCTGCGAGC GGTCGGGTGT GACCGCCATC
GACGTTTCCC GCCTTCATGG TGTCGTGCGG GGCTATGGGC TGGCTGAGGT GGATACGGCG
CGCGCAGCCC TCCAGCCGCT GATGCTGGCC TACGGGTTCG AGGCGCTGGA GCGGGACGGG
ATGCTGGTCT TCCGCATGCG GGACGGACGC AGGAGCGTCG AGGTCAGGCG TGAGGGGCTC
GTGCAGTCGG ACGAACTGGA CGGGGCGGTG GAACTGATCC GCGCCGCCGA GGTGGAGACG
GTCGGGCGGG TCCGTCTGGG TTTCCTCGAG GCTGAAGGCG ACTATGAGGC GCGGCAGGTC
GAGGCCGCCT TCCCGGACGA GGCGACCTTT GCGGTCTCGC AGTCCGAGGT TCCGCTGGTC
CTGACGTCGG CCGAGGCGCG GGGGACGGTC GAGCGGTGGC TGGCCGAGTC GCGGGTGGCG
CGGGACAGTC TGCGGCTTGC GCTGCCGCGG TCGGCACTGG CGCTCGGGGC AGGGGATGTG
CTCGAACTGG AGGGGCGGCG CTATCGCATC GACCGGCTGG AGCAGGCCGA GGCGCAGCTT
GCCGAAGCGG TCCGGGTGGA GCCGGGCATC TACATACCCG CCGACATCGC AGAGCAGCGG
CCGCCTGCGC GCAAGGTCGC GGCGCAAATG CCGGTGCACG CCGTCATCCT CGATCTGCCG
CTGATGACCG GGGCCGAGGT CGCGCATGAG CCGCATCTGG CCGTCACGGC CGCGCCCTGG
CCGGGACGGG TTGCGGTCTG GAGCGCGATG CAGGACGCCG GATACCGGCT GAACGGTCTC
GTCACCGGAG CGGCGACGCT TGGCGTGACG CAGACACCGC TTCGGGCCGC GCCGGCCGGT
CGGTGGGACA TGGGGGCGGC CCTGCGGGTG AAGCTGCAGG GGCCGCCTCT TGCGTCGGCC
TCCGATCTCG AGGTGCTGAA CGGCGCCAAT GTGATGGCCA TCGGCGACGG CTCGGTGGAT
GGCTGGGAAC TGTTCCAGTT CGCCGAGGCG CGTCTCGTCG GTCCCAGGAC GTGGGATCTC
ACGCGAAGGC TGCGGGGGCA GGCCGGGACG GATGCGACGA TGCCGGAGGT CTGGCCCTCG
GGAAGCACGG TGGTGCTGAT CACCCCGGCC CTCGTGCAAC TCGGGGTGCC GCTCGCCGAG
CGCAACCTCG CCCGGCACTA CCGGATTGGC GCTGCGGCGC GTGGATATGA TGATGCGGAT
GTGATCCACC GCGTTGACGC CTGTGCCGGC GTGGGCCTGC GCCCGCTCGC TCCTGTGCAT
CTCGCGGCCG AGCGGCGCGA CGGCGATCTG CTCGTGCGCT GGGTGCGGCG CACGCGGATT
GACGGGGACA GCTGGGAAGG GCGCGAAGTG CCTCTGGGGG AGGGGAGCGA ACTCTATCTG
GTGCGGGTCC GCATGAACGG GCTGGTGGGA CGGCAGGAGG AAGTAACGGC GCCGTGCTGG
ACCTACACGG CGGAGGCGCA GGCGGAGGAT GGTGCGGCAG GCACCTTTAC TGTCGAAGTG
GCACAAGTCT CGGACAGCTT CGGACCCGGC CCGTTCCGGC GCCTTATGGT CTGA
 
Protein sequence
MATLLLAAAG SAIGAGFGGT VLGLTGAVIG RAIGATVGQM IDQRLMGAGS QTVRTGRIER 
FRLMGAGEGA AVAQIFGRNR VAGQVIWASR FLESQSESSS GGKGGGPRTT VVSYSYSVSL
AVALCEGEIL RVGRIWADGA EIAPDTLNLR LYRGTEDQLP DPKIEAVEGA GRAPAYRGIA
YAVIEDLQLE PFGNRVPQFS FEVMRAAQGP LADRVTNLQR AVRGVAMIPG SGEYALATSR
LAYNYGPGES ETANVHTASG QSDFLTSLDQ LRGELPACRS VSLVVSWFGS DLRCGECEIR
PKVEQGSFDA SKMAWRAGGI DRGGAQLVGR LEDRPAYGGT PADAAVIEAI RALHVAGRSV
VYYPFILMEQ LPGNALPNPW TGETGQPVLP WRGRITLSAA PGRAGSPDRT AAAVAEVAAF
FGTGEPDQFR IEGDRILYDG PDEWRYRRFI LHAAWLCRLA GGVSAFCIGS EMRGLTQIRA
SGDSFPAVAE LRRLAADVRS ILGPSVKIGY AADWSEWFGY HPEGDVHFHL DPLWADENID
FIGIDNYMPL SDWRPGEDHA DAHWDSVHEL DYLKANVAGG EGHDWYYRDE AGAAAQDRVP
ITDGAFGEPW VYRCKDLKSW WSLPHHDRIA GARKAQPTAW VPRSKPIWFT EYGCPALDLG
TNQPNLFLDP KSSELSLPRG SSGRRDDVIG MDYLRAMAEY WADEANNPVS PRYGGRMVDM
DRAHVWAWDA RPFPAFPARA DVWSDGDNYA RGHWLNGRAA SQPLAAVVAE ICERSGVTAI
DVSRLHGVVR GYGLAEVDTA RAALQPLMLA YGFEALERDG MLVFRMRDGR RSVEVRREGL
VQSDELDGAV ELIRAAEVET VGRVRLGFLE AEGDYEARQV EAAFPDEATF AVSQSEVPLV
LTSAEARGTV ERWLAESRVA RDSLRLALPR SALALGAGDV LELEGRRYRI DRLEQAEAQL
AEAVRVEPGI YIPADIAEQR PPARKVAAQM PVHAVILDLP LMTGAEVAHE PHLAVTAAPW
PGRVAVWSAM QDAGYRLNGL VTGAATLGVT QTPLRAAPAG RWDMGAALRV KLQGPPLASA
SDLEVLNGAN VMAIGDGSVD GWELFQFAEA RLVGPRTWDL TRRLRGQAGT DATMPEVWPS
GSTVVLITPA LVQLGVPLAE RNLARHYRIG AAARGYDDAD VIHRVDACAG VGLRPLAPVH
LAAERRDGDL LVRWVRRTRI DGDSWEGREV PLGEGSELYL VRVRMNGLVG RQEEVTAPCW
TYTAEAQAED GAAGTFTVEV AQVSDSFGPG PFRRLMV