| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1088 |
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| Symbol | |
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| ID | 5084691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1111324 |
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| End bp | 1111764 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640482646 |
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| Product | NlpC/P60 family phage cell wall peptidase |
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| Protein accession | YP_001167294 |
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| Protein GI | 146277135 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | [TIGR02219] putative phage cell wall peptidase, NlpC/P60 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.242256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0459269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG CGGACGTGGT GGCGGAGGCA CGGCACTGGA TCGGCACGCC CTATGTGCAT
CAGGCCTCGA CACGGGGAGC AGGCACGGAT TGCCTCGGCC TTCTGCGAGG GATCTGGCGG
ACGCTTGTCG GGCCGGAGCC GGTGCTGGTG CCGCCCTATA CCCCGGACTG GTCCGAGCCG
TCGGGCGACG AGCGGCTGAT GGCCGCCTGC GATCGGTGGC TGCTGAGACA GCCGCTGGAC
GCGGCGTCGG AGGGAGACGT TCTTCTGTTC CGAATGCGTC CCGAGGCTGT GGCCAAGCAC
CTCGGCATCC TGGTGTGCAG CGGCCCGGAG GCGTCCTTCG TTCATGCCTA TTGCGGGCAC
GGAGTGGTGG AGAGCCCGCT CTCTGAGCCT TGGGCGCGTC GGCTTGCGGC GCGCTATGCC
TTCCCGGAAA GGAATGACTG A
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| Protein sequence | MSGADVVAEA RHWIGTPYVH QASTRGAGTD CLGLLRGIWR TLVGPEPVLV PPYTPDWSEP
SGDERLMAAC DRWLLRQPLD AASEGDVLLF RMRPEAVAKH LGILVCSGPE ASFVHAYCGH
GVVESPLSEP WARRLAARYA FPERND
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