Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1064 |
Symbol | |
ID | 5083356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1092962 |
End bp | 1094320 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640482622 |
Product | DNA repair protein RadA |
Protein accession | YP_001167270 |
Protein GI | 146277111 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.66544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAT CCTCCCCCGT CTTCACCTGC CAGACCTGCG GCGCCGTCCA CCGCAAGTGG GCCGGCCGCT GCGACGCCTG CGGCGCCTGG AACTCGATCA CCGAGGAGAC TCCGCTCTCG AGCGGGCCGA AGGCGCTCGG CTCCAAGGGC CGCACCATCG CGCTCACCGA CCTTGCCACC GAAGAGGCGC CCCCGCCGCG CACCTCCTCG GGCATCGACG AGCTTGACCG CGTGCTCGGC GGCGGCCTTG TGCCCGCTTC GGCGATCCTT GTGGGCGGCG ATCCGGGCAT CGGAAAATCC ACGCTCCTCC TGCAGGCGGC CGCAAGCTTC GCCAACGGCG GGGTGAAATG CCTCTACATC TCGGGCGAAG AGGCCCCGGC GCAGGTGCGG ATGCGCGCCC AGCGGCTCGG CCTCGGGCAG GCCCCGGTGG CGCTCGGCGC CGAGACGAAC CTGCGCGACA TCCTGACAAC GCTCGACGCC GAGCGCCCGG CGCTCGCCAT CATCGACTCG ATCCAGACCA TGTGGCTCGA CAATGTCGAG TCGGCCCCCG GCTCGGTGGC CCAGGTCCGC GCCTCGGCCC ACGAACTCGT GACCTTCGCC AAGCGGCGGG GCGTGGCCAT CGTCATCGTG GGGCATGTGA CGAAGGAGGG CCAGATCGCC GGCCCCCGCG TGGTCGAGCA CATGGTCGAC ACCGTCCTCT ATTTCGAGGG CGAGCGCGGC CACCAGTTCC GCATCCTGCG TGCCGTCAAG AACCGCTTCG GCCCCGCCGA CGAGATCGGC GTCTTCGAGA TGACCGGCGG CGGGCTCGCG CAGGTCTCCA ACCCGTCCGC GCTCTTCCTG TCGGACCGCG ACCAGCCCGC TCCCGGCTCG GCCGTCTTCG CGGGCATCGA GGGCACGCGC CCCGTCCTCA CCGAGATCCA GGCCCTCGTC GCGCCCTCGC CGCTCGGCAC ACCGCGCCGG ACGGTGGTGG GGCTCGACAG CGGCCGGCTC TCGACCATCC TCGCCGTCCT CGAGGCGCGC TGCGGCATCC CCTTCGCGGG CCTCGACGTT TTTCTGAATG TGGCCGGGGG CATGCGCGTC TCGGAACCCG CCGCCGACCT CGCCGTGGCC GCGGCCCTCG TCTCGGCGCG CGAGGATGTG GCAATTCCGC CCGACATGGT GCTCTTCGGC GAGATCTCCC TCTCGGGCGC CCTCCGCCCC GTGACCCAGA CGGAAAGCCG CTTGAAAGAG GCCTCGAAAC TTGGTTTCTC GCAGGCAGTT GCGCCGACCC GCTCGAAAGT GGGCCAGGAT GCGGGGATGC GGGTGCGCCA GATGCCCGAC CTCGCGGCAT TCGTGGGTGA GATGTTCGGG GCAGGGTAA
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Protein sequence | MAKSSPVFTC QTCGAVHRKW AGRCDACGAW NSITEETPLS SGPKALGSKG RTIALTDLAT EEAPPPRTSS GIDELDRVLG GGLVPASAIL VGGDPGIGKS TLLLQAAASF ANGGVKCLYI SGEEAPAQVR MRAQRLGLGQ APVALGAETN LRDILTTLDA ERPALAIIDS IQTMWLDNVE SAPGSVAQVR ASAHELVTFA KRRGVAIVIV GHVTKEGQIA GPRVVEHMVD TVLYFEGERG HQFRILRAVK NRFGPADEIG VFEMTGGGLA QVSNPSALFL SDRDQPAPGS AVFAGIEGTR PVLTEIQALV APSPLGTPRR TVVGLDSGRL STILAVLEAR CGIPFAGLDV FLNVAGGMRV SEPAADLAVA AALVSAREDV AIPPDMVLFG EISLSGALRP VTQTESRLKE ASKLGFSQAV APTRSKVGQD AGMRVRQMPD LAAFVGEMFG AG
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