Gene Rsph17025_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1048 
Symbol 
ID5083340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1075499 
End bp1076677 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content71% 
IMG OID640482605 
Producthypothetical protein 
Protein accessionYP_001167254 
Protein GI146277095 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC CGCTCAATCC CGCGATGGCC GCGACCTTCC CGCCCCCGGT GATGGAGGCG 
CGGCGCTGGA TCCAGGGGCT GAGCTTTCCG GCGGATCGCC CGCTTCTCAA TCTGAGCCAG
GCCGCGCCGG TCGAGCCTCC GCCCCCCGGC CTGCGCGAGG CGCTGGCCGA AGCGGCGCTG
AGCGATCCGC AGGCCCATCT CTACGGCCCG GTGCTCGGGA TGCCGGCCCT GCGCGAGGAG
CTTGCCTCCC AGTGGTCGCG CGCCTACGGC GGGCGGATCG AGGCGGCTCA GGTGGCCATC
ACGCAGGGCT GCAACCAGGC CTTCTGCGCG ATCATGGCGA CCCTCGCGGC GGCCGGTGAC
GAGGTGATCC TGCCGACCCC GTGGTATTTC AATCACAAGA TGTGGCTCGA CATGCAGGGC
GTGACGGCGG TGCCGCTGCC GACCGGCCCG ACACTGCGGC CCGACGCCGA GCGCGCGGCG
GCGCTTGTCA CACCGCGGAC CCGTGCCATC GTGCTCGTCA CGCCCAACAA CCCGGGCGGC
GTCGAATATC CGGCCGCAAC GCTTGCGGCC TTCCGGGATC TCGCGCGCAG CCGCGGCCTG
GCCCTGATCC TCGACGAAAC CTACCGCGAC TTCGACAGCC GCACCGGCGC GCCACACCAG
CTCTTTGCCG ATCCCGAATG GGACGGCGTG CTGGTGCATC TCTATTCCTT CTCCAAGGCC
TATCGGCTGA CGGGGCACCG TGTCGGCGCC GTGGTGGCCT CGGCCGCGCG TCTGGCCCAG
GTCGAGAAGT TCCTCGATAC GGTGGCGATC TGCCCGAGCC AGCTTGGCCA GATCGGCGCG
CTCTGGGGGA TGCGCCACCT GGCGCACTGG GTCGCGGGCG AGCGGGACGA GATCCTCGCA
CGGCGGACGG CGATGGTGGG CGGCTTTGCG GCGCTGCCGG GTTGGACGCT TCTCGGCTGC
GGCGCCTATT TTGCCTATGT GACGCATCCC TTCGCCGAAG CGTCCGACCG GCTCGCCCAG
CGGCTGGTAC ACGAGGCGGG CGTGCTCATG CTGCCCGGAA CCATGTTCCG GCCCGAGGGC
GCGGACGAGG GAGGACGCGA ACTCCGCATC GCCTTTGCCA ATGTGGACAC GGCCGGGATC
GCCGATCTGT TCGCGCGGCT GGCGCAGGTC GCGGACTGA
 
Protein sequence
MTLPLNPAMA ATFPPPVMEA RRWIQGLSFP ADRPLLNLSQ AAPVEPPPPG LREALAEAAL 
SDPQAHLYGP VLGMPALREE LASQWSRAYG GRIEAAQVAI TQGCNQAFCA IMATLAAAGD
EVILPTPWYF NHKMWLDMQG VTAVPLPTGP TLRPDAERAA ALVTPRTRAI VLVTPNNPGG
VEYPAATLAA FRDLARSRGL ALILDETYRD FDSRTGAPHQ LFADPEWDGV LVHLYSFSKA
YRLTGHRVGA VVASAARLAQ VEKFLDTVAI CPSQLGQIGA LWGMRHLAHW VAGERDEILA
RRTAMVGGFA ALPGWTLLGC GAYFAYVTHP FAEASDRLAQ RLVHEAGVLM LPGTMFRPEG
ADEGGRELRI AFANVDTAGI ADLFARLAQV AD