| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1024 |
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| Symbol | |
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| ID | 5084641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1050745 |
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| End bp | 1052301 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640482581 |
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| Product | phytoene dehydrogenase-related protein |
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| Protein accession | YP_001167230 |
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| Protein GI | 146277071 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGA CCACGCATGT ATCCGATGCC GACCATGCCA TTGTGATCGG CTCGGGGCTC
GGGGGTCTGT CCGCGGCCAT GCGGCTCGGC GCCAAGGGCT GGCGCGTCAC CGTGATCGAC
AAGCTGGACG TTCCCGGCGG GCGCGGCTCC TCGATCACGC AGGAGGGGCA CCGCTTCGAC
CTTGGGCCGA CCATCGTCAC CGTCCCCCAG TCGCTGCGCG ACCTGTGGGC CACCTGCGGG
CGCGATTTCG ACAAGGATGT GGCTCTCAAG CCGGTCGATC CCTTCTATGA GGTGCGCTGG
CCCGACGGGT CGAACTTCAC CGTCCGGCAA TCGACCGAGG CGATGAAGGC CGAGATTGCG
CGCCTGTCGC CCGGTGACGT CGCGGGCTAC GAGACGTTCC TCAAGGACAG CGAGAAACGC
TACTGGTTCG GCTACGAGAA CCTCGGCCGC CGGCCGATGC ACAAGCTGTG GGATCTCATC
AAGGTCCTGC CGACCTTCGG GATGCTGCGG GCCGACAGGT CTGTCTACCA GCACGCCGCC
CGGCGCGTGC AGGACGAGCG GCTGCGCATG GCACTGTCGT TCCACCCGCT GTTCATCGGC
GGAGACCCTT TCAACGTCAC CTCGATGTAT ATCCTCGTCA GCCAGCTCGA GAAGGAATTC
GGGGTCCACT ACGCCATCGG CGGGGTGGCC GCGATCGCGC AGGCGATGGC CCAGGTGATC
GAGGGGCAGG GCGGCGCCTT CCGCATGAAC ACCGAGGTCG ATGAGATCGT CGTCGAGAAC
GGCGAGGCGA AGGGCGTGCG GCTCGCCTCG GGCGAGGTGC TGCGCGCGGG TCTCGTGGTC
TCGAACGCCG ATGCCGGGCA CACCTACATG CGGCTCCTGC GCAACCACAA GCGCAAGCGG
TGGACCGACG CCCATGTGAA AAGCCGCCGC TGGTCGATGG GTCTCTTCGT CTGGTATTTC
GGCACCAAGG GCACGAAGGG CATGTGGTCG GACGTCGGCC ACCACACGAT CATCAACGCG
CCGCGCTACA AGGGGCTGGT CGAGGACATC TTCCTCAAGG GCAAGCTGGC CAAGGACATG
AGCCTTTACA TCCACCGGCC CTCGATCACC GACCCGACCG TGGCGCCCGA GGGCGACGAC
ACCTTCTACG CCCTCTCGCC GGTGCCGCAC CTGAAACATG CCAACCCGGT GGACTGGCAG
GCGATGGAAG AGCCCTACCG GCAGAGCGTG CTCGAGGTGC TGGAGCAGTC GATGCCCGGC
ATCGGCGACC GCATCGGGCC GTCGCTGGTC TTCACGCCCG AGACCTTCCG CGACCGCTAT
CTCAGCCCTT GGGGCGCCGG CTTCTCGATC GAGCCGCGCA TCCTGCAGTC GGCCTGGTTC
CGGCCGCACA ACATCTCGGA GGAGGTCAAG GGCCTCTTCC TCGTCGGCGC CGGCACCCAT
CCGGGCGCGG GCGTGCCCGG TGTGATCGGT TCGGCCGAAG TGATGGCCAA GCTCGCCCCC
GACGCGCCGC GCGCGCGCCG CGAGGCCGAA CCCGCTGAAA GGCTGGCCGC GGAATGA
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| Protein sequence | MPATTHVSDA DHAIVIGSGL GGLSAAMRLG AKGWRVTVID KLDVPGGRGS SITQEGHRFD
LGPTIVTVPQ SLRDLWATCG RDFDKDVALK PVDPFYEVRW PDGSNFTVRQ STEAMKAEIA
RLSPGDVAGY ETFLKDSEKR YWFGYENLGR RPMHKLWDLI KVLPTFGMLR ADRSVYQHAA
RRVQDERLRM ALSFHPLFIG GDPFNVTSMY ILVSQLEKEF GVHYAIGGVA AIAQAMAQVI
EGQGGAFRMN TEVDEIVVEN GEAKGVRLAS GEVLRAGLVV SNADAGHTYM RLLRNHKRKR
WTDAHVKSRR WSMGLFVWYF GTKGTKGMWS DVGHHTIINA PRYKGLVEDI FLKGKLAKDM
SLYIHRPSIT DPTVAPEGDD TFYALSPVPH LKHANPVDWQ AMEEPYRQSV LEVLEQSMPG
IGDRIGPSLV FTPETFRDRY LSPWGAGFSI EPRILQSAWF RPHNISEEVK GLFLVGAGTH
PGAGVPGVIG SAEVMAKLAP DAPRARREAE PAERLAAE
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