Gene Rsph17025_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0997 
Symbol 
ID5083213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1020643 
End bp1021338 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID640482554 
ProductABC transporter related 
Protein accessionYP_001167203 
Protein GI146277044 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID[TIGR03410] urea ABC transporter, ATP-binding protein UrtE 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGA CCGAAGGGCT GACCCTGCAT TACGGCGGCA GCCAGATCCT TTACGGGATC 
GACATGGAGG CCCGCGCGGG CGAGGTGACC TGCATCATGG GCACCAACGG CGTGGGCAAG
ACCTCGCTGC TCAAGGCCAT CGCGGGGGCG CATCCGCGAT CGGGCGGGCG CGTGATCCTT
GATGGCGAAG AGCTGCCACG GCTGCCGCCG CAGGCCATGG CGCGGCGCAG GCTGGGGTTC
GTGCCGCAGG GGCGGATGAT CTTCCCGCTG CTGACGGTGA CGGAGAATCT CGAGACCGGC
TTTGCCGTCC TGCCGCGATC CGAGCACCGC ATCCCGGACG AGATCTACGA GCTGTTCCCG
GTGCTGAGGG ACATGGCGCA CCGGCGGGGC GGGGACCTCT CCGGCGGGCA GCAGCAGCAG
CTGGCCATTG CCCGCGCCCT GATCATGAAG CCGAGGCTTC TGCTCCTCGA CGAGCCGACC
GAGGGCATCC AGCCCAACAT CATCCAGCAG ATCGGCCGCG TGATCTCGTA TCTGCGCGGG
AAGGGCGACA TGGCGATCAT CCTGGTCGAG CAGTATTTCG AGTTCGCCTA CGGGCTCGCC
GACCGCTTCT ATGTGCTCAA GCGCGGATCG GTCGATGTGG CGGGCACCAA GGCCGAACTG
GGGCGTGACC GGGTGCGGCA GGCCGTTTCG GTCTGA
 
Protein sequence
MLKTEGLTLH YGGSQILYGI DMEARAGEVT CIMGTNGVGK TSLLKAIAGA HPRSGGRVIL 
DGEELPRLPP QAMARRRLGF VPQGRMIFPL LTVTENLETG FAVLPRSEHR IPDEIYELFP
VLRDMAHRRG GDLSGGQQQQ LAIARALIMK PRLLLLDEPT EGIQPNIIQQ IGRVISYLRG
KGDMAIILVE QYFEFAYGLA DRFYVLKRGS VDVAGTKAEL GRDRVRQAVS V