Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0997 |
Symbol | |
ID | 5083213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1020643 |
End bp | 1021338 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640482554 |
Product | ABC transporter related |
Protein accession | YP_001167203 |
Protein GI | 146277044 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGA CCGAAGGGCT GACCCTGCAT TACGGCGGCA GCCAGATCCT TTACGGGATC GACATGGAGG CCCGCGCGGG CGAGGTGACC TGCATCATGG GCACCAACGG CGTGGGCAAG ACCTCGCTGC TCAAGGCCAT CGCGGGGGCG CATCCGCGAT CGGGCGGGCG CGTGATCCTT GATGGCGAAG AGCTGCCACG GCTGCCGCCG CAGGCCATGG CGCGGCGCAG GCTGGGGTTC GTGCCGCAGG GGCGGATGAT CTTCCCGCTG CTGACGGTGA CGGAGAATCT CGAGACCGGC TTTGCCGTCC TGCCGCGATC CGAGCACCGC ATCCCGGACG AGATCTACGA GCTGTTCCCG GTGCTGAGGG ACATGGCGCA CCGGCGGGGC GGGGACCTCT CCGGCGGGCA GCAGCAGCAG CTGGCCATTG CCCGCGCCCT GATCATGAAG CCGAGGCTTC TGCTCCTCGA CGAGCCGACC GAGGGCATCC AGCCCAACAT CATCCAGCAG ATCGGCCGCG TGATCTCGTA TCTGCGCGGG AAGGGCGACA TGGCGATCAT CCTGGTCGAG CAGTATTTCG AGTTCGCCTA CGGGCTCGCC GACCGCTTCT ATGTGCTCAA GCGCGGATCG GTCGATGTGG CGGGCACCAA GGCCGAACTG GGGCGTGACC GGGTGCGGCA GGCCGTTTCG GTCTGA
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Protein sequence | MLKTEGLTLH YGGSQILYGI DMEARAGEVT CIMGTNGVGK TSLLKAIAGA HPRSGGRVIL DGEELPRLPP QAMARRRLGF VPQGRMIFPL LTVTENLETG FAVLPRSEHR IPDEIYELFP VLRDMAHRRG GDLSGGQQQQ LAIARALIMK PRLLLLDEPT EGIQPNIIQQ IGRVISYLRG KGDMAIILVE QYFEFAYGLA DRFYVLKRGS VDVAGTKAEL GRDRVRQAVS V
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