Gene Rsph17025_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0956 
Symbol 
ID5085023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp978149 
End bp979198 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content66% 
IMG OID640482513 
Producthypothetical protein 
Protein accessionYP_001167162 
Protein GI146277003 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0392869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGC GCGCGGTTTC CCTTTCGGTG CTGGCCTTCG TGCTGGCGCT CCTGATCCTC 
TTGGCGGCCG ACGTTCTTCT GGTGATCTTC GCCGGCATCC TGTTCGGCGT GTTCCTCTCG
GCCGGAGCGG GGCTCGTCTC GCGCGTGACC GGCGTCGGGC GGGGGGGCGC CATCGCGCTC
TTCATCCTGC TGGTGACGGC GGGGCTGATC GGCAGCTTCC TCGCCTTCGC CCCGGCCATG
CTCGAGCAGG CCGACGAACT GGCGCGCCAG CTTCCGCCGG CGCTTGAAAG CCTGCGTGAC
AGGATCTCAA GCTTCAGCTG GGGCCCCTCG CTCCTGGGCC GCCTGGCCCC GTCGCGGCTG
ATGTCGGGCG AGGGCGGCTT TGCCTCGACC GCGGTCAGTG CCACCTTCGG CGCGATCGGC
AACTTCGTCA TCATCCTCTT CGTGGGCCTC TATGCGGCCA TTGATCCCGG TCTCTACCGG
CGCGGCCTGC GGGCGCTGCT GTCCCCGGAG CTGCGCCCGC GCGGCGAGGA AGTGATGGAT
GTCGCGGGAC ATACGTTGCG CAACTGGCTG GGCGGGCAAC TGATCTCGAT GAGCTTTGTC
GGGCTCTTCA CCTGGCTCGG GCTCTGGCTC ATCGGCATCC CGCTGGCCTT CATCCTGGGA
CTGATCGCGG CGATCCTCAC CTTCATTCCG AACATCGGTC CGGTCCTTTC GGCCGTGCCG
GCGCTGCTGC TGGCCATGCC CGAGGGCTGG AGCCAGGTGG GGCTGGTGCT GGCCGTGTTC
CTCACCGTCC AGGCCGTCGA GAGCTACGTC GTCACGCCCA TCATCCAGAA GGAGAGGGTT
TCCTTGCCGC CGGCCCTCAT CATCTCGGCG CAACTGCTGA TGGGGGTGCT GTTCGGGCTG
ATGGGGCTTC TGCTTGCCAC GCCGCTGGCC GCGCTGGTGC TCGCCCTGGT GCGTGAGGTT
TATGTGCATG ATTATCTTGA AGAAAGGCAG GAGACGCTCC TTCTGCGGGA TCCGCCGGAT
CAACCAATGC AAGAAAAAAG ACAACTTTAG
 
Protein sequence
MSRRAVSLSV LAFVLALLIL LAADVLLVIF AGILFGVFLS AGAGLVSRVT GVGRGGAIAL 
FILLVTAGLI GSFLAFAPAM LEQADELARQ LPPALESLRD RISSFSWGPS LLGRLAPSRL
MSGEGGFAST AVSATFGAIG NFVIILFVGL YAAIDPGLYR RGLRALLSPE LRPRGEEVMD
VAGHTLRNWL GGQLISMSFV GLFTWLGLWL IGIPLAFILG LIAAILTFIP NIGPVLSAVP
ALLLAMPEGW SQVGLVLAVF LTVQAVESYV VTPIIQKERV SLPPALIISA QLLMGVLFGL
MGLLLATPLA ALVLALVREV YVHDYLEERQ ETLLLRDPPD QPMQEKRQL