Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0956 |
Symbol | |
ID | 5085023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 978149 |
End bp | 979198 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640482513 |
Product | hypothetical protein |
Protein accession | YP_001167162 |
Protein GI | 146277003 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0392869 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGC GCGCGGTTTC CCTTTCGGTG CTGGCCTTCG TGCTGGCGCT CCTGATCCTC TTGGCGGCCG ACGTTCTTCT GGTGATCTTC GCCGGCATCC TGTTCGGCGT GTTCCTCTCG GCCGGAGCGG GGCTCGTCTC GCGCGTGACC GGCGTCGGGC GGGGGGGCGC CATCGCGCTC TTCATCCTGC TGGTGACGGC GGGGCTGATC GGCAGCTTCC TCGCCTTCGC CCCGGCCATG CTCGAGCAGG CCGACGAACT GGCGCGCCAG CTTCCGCCGG CGCTTGAAAG CCTGCGTGAC AGGATCTCAA GCTTCAGCTG GGGCCCCTCG CTCCTGGGCC GCCTGGCCCC GTCGCGGCTG ATGTCGGGCG AGGGCGGCTT TGCCTCGACC GCGGTCAGTG CCACCTTCGG CGCGATCGGC AACTTCGTCA TCATCCTCTT CGTGGGCCTC TATGCGGCCA TTGATCCCGG TCTCTACCGG CGCGGCCTGC GGGCGCTGCT GTCCCCGGAG CTGCGCCCGC GCGGCGAGGA AGTGATGGAT GTCGCGGGAC ATACGTTGCG CAACTGGCTG GGCGGGCAAC TGATCTCGAT GAGCTTTGTC GGGCTCTTCA CCTGGCTCGG GCTCTGGCTC ATCGGCATCC CGCTGGCCTT CATCCTGGGA CTGATCGCGG CGATCCTCAC CTTCATTCCG AACATCGGTC CGGTCCTTTC GGCCGTGCCG GCGCTGCTGC TGGCCATGCC CGAGGGCTGG AGCCAGGTGG GGCTGGTGCT GGCCGTGTTC CTCACCGTCC AGGCCGTCGA GAGCTACGTC GTCACGCCCA TCATCCAGAA GGAGAGGGTT TCCTTGCCGC CGGCCCTCAT CATCTCGGCG CAACTGCTGA TGGGGGTGCT GTTCGGGCTG ATGGGGCTTC TGCTTGCCAC GCCGCTGGCC GCGCTGGTGC TCGCCCTGGT GCGTGAGGTT TATGTGCATG ATTATCTTGA AGAAAGGCAG GAGACGCTCC TTCTGCGGGA TCCGCCGGAT CAACCAATGC AAGAAAAAAG ACAACTTTAG
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Protein sequence | MSRRAVSLSV LAFVLALLIL LAADVLLVIF AGILFGVFLS AGAGLVSRVT GVGRGGAIAL FILLVTAGLI GSFLAFAPAM LEQADELARQ LPPALESLRD RISSFSWGPS LLGRLAPSRL MSGEGGFAST AVSATFGAIG NFVIILFVGL YAAIDPGLYR RGLRALLSPE LRPRGEEVMD VAGHTLRNWL GGQLISMSFV GLFTWLGLWL IGIPLAFILG LIAAILTFIP NIGPVLSAVP ALLLAMPEGW SQVGLVLAVF LTVQAVESYV VTPIIQKERV SLPPALIISA QLLMGVLFGL MGLLLATPLA ALVLALVREV YVHDYLEERQ ETLLLRDPPD QPMQEKRQL
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