Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0951 |
Symbol | |
ID | 5085018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 972184 |
End bp | 973188 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640482508 |
Product | basic membrane lipoprotein |
Protein accession | YP_001167157 |
Protein GI | 146276998 |
COG category | [R] General function prediction only |
COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.263861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.260715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGAT TCGCAACCAC ACGGCGCGGG CTTCTGATGG CCGGAGGGGC GGCGCTTGCG CTGGGGGCCT TGCCCCGGAC GCTGCGCGCG CAGGAGGCGC TGAAGGTCGC CGGCATCTAT ACCGTGCCGG TCGAGCAGCA GTGGGTCAGC CGCATCCACA AGGCCGCCGA GGCGGCCCGC GCCGCCGGGC GGGTGGAATA CACCTTCACC GAGAATGTGG CCAACACCGA CTATCCCCGC GTCATGCGCG AATATGCCGA GAGCGGCGTC AGGCTGATCG TGGGCGAGAT CTTCGGCGTC GAGCAGGAGG CCCGCGAGGT GGCGGCCGAA TATCCCGACG TGGCCTTCCT CATGGGGTCG AGTCTGCCGC CCGACGAGTC GATCCCGAAC CTCGCCGTCT TCGACAACTA CATCCAGGAC GCCGCCTACC TGTCCGGTCT CATTGCCGGA TCCATGACGG CCGGCAACAT CGGCATGGTT GGCGGCTTTC CGATCCCCGA GGTCAACCGC CTGATGAACG CCTTCATGGC GGGCGCGCGC GAGGTCAAGC CGGACGTGAC CTTCCAGGTC AGCTTCATCG GCTCGTGGTT CGATCCGCCG AAAGCGAAGG AGACCGCCTT CGCCATGATC GAGAACGGCG CCGACCTTCT CTATGCCGAG CGGTTCGGCG TGTCGGATGC CGCGAAGGAG CGGGGCGTGC TGGCCATCGG CAACGTGATC GACACGCAGG GCGACTATCC CGACACGGTG GTGGCCTCGG CGATCTGGCA TTTCGAGCCG ACATTCGACC GGGCGGTCGA GGAGGTTCAG GCCGGCAGCT TCAAGGCCGC CGACTACGGC GTCTATTCCT TCATGAAGGA AGGCGGCTCG TCGCTCGCGC CGCTGGGCAC CTTCGAGGAT AAGGTGCCGG AAGAGGCCAA GGCCCTCGTG GCCGAGCGCG AGGCCGCGAT CCGGGCCGGC ACCTTCACCG TCGCCATCGA CGACAGCGAG CCGAAATCCT CGTGA
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Protein sequence | MTGFATTRRG LLMAGGAALA LGALPRTLRA QEALKVAGIY TVPVEQQWVS RIHKAAEAAR AAGRVEYTFT ENVANTDYPR VMREYAESGV RLIVGEIFGV EQEAREVAAE YPDVAFLMGS SLPPDESIPN LAVFDNYIQD AAYLSGLIAG SMTAGNIGMV GGFPIPEVNR LMNAFMAGAR EVKPDVTFQV SFIGSWFDPP KAKETAFAMI ENGADLLYAE RFGVSDAAKE RGVLAIGNVI DTQGDYPDTV VASAIWHFEP TFDRAVEEVQ AGSFKAADYG VYSFMKEGGS SLAPLGTFED KVPEEAKALV AEREAAIRAG TFTVAIDDSE PKSS
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