Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0885 |
Symbol | |
ID | 5083611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 901667 |
End bp | 902851 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640482442 |
Product | HflK protein |
Protein accession | YP_001167093 |
Protein GI | 146276934 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.240559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAACG GAGGACCTTG GGGCGGAGGC GGAGGCGACC GCGGCGACAG GGATGGGCGT GACGGCCGCG GCGGGCGGCG TCCCGGCGGT GGTGACGGCT CGCAGATCCC CGAGATCGAC GAGATCGTGA AGAAAGGACA GGAACAGTTG CGTGTGCTGA TGGGCGGCCG CGGCCGTACG AACGGCGGAC GCGGTGGCGG TGGCGGTGGC GGAAACGGGG GCAACCCGAT GGGCCCGCTC TTCACCCGTC AGGGTCTCGC GCTGGGCGCG CTCGCGCTGG TGGGCGTCTG GGCCTTCATG TCCCTCTACA CGGTGCGCCC GGAGGAACGC TCGGTCGAGC TGTTTCTGGG TGAGTTCAGC GATATCGGCA ATCCGGGCCT GAACTTCGCG CCCTGGCCGG TCGTCACCGC CGAGGTGGTG CAGGTGACCG GGGAACGGAC CACCGACATC GGCACCGGCC GCGGCGGCGA TACCGACAAC GGGCTGATGC TGACCCGCGA CCAGAACATC GTGGACATCG AGTTCCAGGT GGTCTGGAAC ATCTCGGATC CGGCGCAATT CCTGTTCAAC CTTGCCGATC CGGCGGACAC GATCCGCGCC GTGTCGGAAT CCGCGATGCG CGATATCATC GCGCGATCCG AACTGTCTCC GATCCTCAAC CGGGACCGCG GCATCATCGC CTCGGATCTG CTTGCGGCGG TGCAGACCAC GCTCGACAGC TATCAGGCCG GCATCAACGT CGTCCGCGTC AACTTCGACA AGGCCGACCC GCCTCAGGAA GTGATCGACA GCTTCCGCGA AGTGCAGGCG GCCCAGCAGG AGCGTGACCG TCTCGAGAAG GAAGCCGACG CCTATGCCAA CCGCGTGACG GCGGCGGCCC GCGGGGAAGC CGCGCGGCTG ACCGAACAGG CCGAAGGCTA CCGCGCCGAG GTGGTGAACA ACGCCGAGGG TGAGGCGAGC CGCTTCATCT CGATCTACGA CGAATATGTG AAGGCGCCCG ACGTCACCCG CCGCCGCCTG TATCTCGAGA CGATGGAGAA GGTGCTCGGT TCGATGGACA AGGTGATCCT TGACGGGATC GACGGACAGG GCGGCTCCGG CGTGGTGCCC TACCTGCCCC TGAACGAGCT GGGTCGCAAC TCCGCCGCCG CCCGCGCGGC CACCAACGGC GGGGAGGCCA ACTGA
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Protein sequence | MSNGGPWGGG GGDRGDRDGR DGRGGRRPGG GDGSQIPEID EIVKKGQEQL RVLMGGRGRT NGGRGGGGGG GNGGNPMGPL FTRQGLALGA LALVGVWAFM SLYTVRPEER SVELFLGEFS DIGNPGLNFA PWPVVTAEVV QVTGERTTDI GTGRGGDTDN GLMLTRDQNI VDIEFQVVWN ISDPAQFLFN LADPADTIRA VSESAMRDII ARSELSPILN RDRGIIASDL LAAVQTTLDS YQAGINVVRV NFDKADPPQE VIDSFREVQA AQQERDRLEK EADAYANRVT AAARGEAARL TEQAEGYRAE VVNNAEGEAS RFISIYDEYV KAPDVTRRRL YLETMEKVLG SMDKVILDGI DGQGGSGVVP YLPLNELGRN SAAARAATNG GEAN
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