| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0827 |
|---|
| Symbol | |
|---|
| ID | 5084933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 843574 |
|---|
| End bp | 844101 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640482384 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001167036 |
|---|
| Protein GI | 146276877 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.272641 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC TTTTCTGGCT GACCGACGCA CAGATGGCGC GGCTTCAACC CTTCTTTCCC
AAGAGCCATG GCAAGCCGCG CGTCGATGAC CGGCGTGTGT TGAGCGGGAT AATCTTCATC
AACCGCAATG GCTTGCGGTG GTGTGATGCG CCCAAGGAGT ATGGTCCGCC AAAGACCCTC
TACAACCGCT GGAAGCGGTG GAGCGACAAG GGGGTCTTCG CCCGGATGAT GGTTGGGCTG
GCTGCCGAGG CCGCTGTGCC GAAGACGGTG ATGATCGACG CGACCTATCT CAAGGCGCAT
CGCACGGCGA CCAGCCTGCG GTCGAAAAAG GGGGGGCAGG CGACTGACGC ATTCCGCGTG
GTGGGATACG CGCCGCCGGG TAGAAAACCG GCGGCGCCAT TCCCTCGACT CGAGCCTCGA
TCGCGAAAGG GCTCATTCCC GATCAGCCTG CAAATCGAGA TCAGGGTCGG GCGCCGTAGC
GCCGACATCG CCTCGCGCAG TGTCCGCTCG CTCGGCATTC TTCACTGA
|
|---|
| Protein sequence | MSNLFWLTDA QMARLQPFFP KSHGKPRVDD RRVLSGIIFI NRNGLRWCDA PKEYGPPKTL
YNRWKRWSDK GVFARMMVGL AAEAAVPKTV MIDATYLKAH RTATSLRSKK GGQATDAFRV
VGYAPPGRKP AAPFPRLEPR SRKGSFPISL QIEIRVGRRS ADIASRSVRS LGILH
|
|---|
| |