Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0702 |
Symbol | |
ID | 5082972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 711311 |
End bp | 712147 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640482260 |
Product | TPR repeat-containing protein |
Protein accession | YP_001166913 |
Protein GI | 146276754 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAAGT CTGGCGCGCG GATGCTCGGC ACGGCCCTCT GTGTCGCGCT TCTGACCGGC TGTGGCGGTG GCAGCCAGAA AGAGCCGCCC CTCGAGAATT TCACGGCCGA ACAGATCTAC CAGCGCGGCG AATACGAACT CGAGGCGCAG ACCAAGCCCG ATCGCGCGAT CCGCTACTTC TCGGAGGTGG AACGGCTCTA TCCCTACACG GAATGGGCCA AGCGCGCGCT GATCATGCAG GCCTACAGCT ACCACAAGGC CAAGAACTAC GAAGAGGCGC GGGGCGCGGC CCAGCGGTTC CTCGACTTCT ACCCGGGCGA CGAGGATGCG GCCTATGCGC AGTATCTGCT GGCCCTGTCC TACTACGACC AGATCGACGA GGTCGGCCGC GACCAGGGCC TGACCTTCCA GGCGCTGCAG GCGCTGCGCG TGGTGATCGA GCAATATCCC GACAGCGAAT ATGCGCAGTC GGCGATCCTC AAGTTCGACC TTGCCTTCGA CCATCTCGCC GCGAAAGAGA TGGAGATCGG CCGCTACTAC CTCAAGCGCG GCCACTATTC GGCGGCCATC AACCGCTTCC GCACCGTGGT CGAGGAGTTC CAGACCACCA CGCACACGGC CGAGGCGCTG CACCGGCTGG TCGAAGGCTA TCTCGCGCTC GGCCTGCAGA ACGAGGCGCA GACGGCGGGG GCGATCCTCG GGCACAACTA CCGCTCCAGC CCCTTCTACG ACGACAGCTA CAGGCTGCTC ACCGGCCGCG GGCTGACGAT GGAAGCACGG GGCGACAGCT GGCTTGCACA GGTCTATCGC CAGATGATCC GCGGCGAGTG GCTCTGA
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Protein sequence | MVKSGARMLG TALCVALLTG CGGGSQKEPP LENFTAEQIY QRGEYELEAQ TKPDRAIRYF SEVERLYPYT EWAKRALIMQ AYSYHKAKNY EEARGAAQRF LDFYPGDEDA AYAQYLLALS YYDQIDEVGR DQGLTFQALQ ALRVVIEQYP DSEYAQSAIL KFDLAFDHLA AKEMEIGRYY LKRGHYSAAI NRFRTVVEEF QTTTHTAEAL HRLVEGYLAL GLQNEAQTAG AILGHNYRSS PFYDDSYRLL TGRGLTMEAR GDSWLAQVYR QMIRGEWL
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