Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0690 |
Symbol | murD |
ID | 5082960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 698151 |
End bp | 699548 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640482248 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_001166901 |
Protein GI | 146276742 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.451277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCCG TCCGTGGCCT CGAGGGCCGA AAGGTGGCCG TGCTGGGCCT CGGCCGCTCG GGCCTTGCCA CCGCCCGTGC GCTGCAAGCC GGGGGCGCCG AGCCGCTCCT CTGGGACGAC AGTCCCGAGG CGCGGGCCAA TGCCGAGGGG CAGGGCTTCG CGGTGACGGA TCTCACGCGC GAGCGGGCGT TCGAGGATGT GGCGCTGCTT GTGACCAGCC CCGGCATCCC GCATCTCTAT CCGGCGCCGA ACCCGGTGAT CGCCCGCGCG ATGGCTGCGG GCGTGCCGGT GGACAATGAC ATCGGCCTCT TCTTCCGAAG CTTTGCCACG CGCGACTGGG ACGCGTTCGA CCAGATGCCG CGCGTGGTCT GCGTCACCGG CTCGAACGGC AAATCCACGA CGACCGCGCT GATCCATCAC ATCCTCGCCG AGAGCGGTCG GCCCACCCAG ATGGCGGGCA ACATTGGCCG GGGTGTCCTC GATCTCGACC CGGCCCGCGA CGGCGAGGTG GTGGTGCTGG AACTCTCCTC CTACCAGACC GATCTGGCGC GCGCGCTGAC GCCGGATGTG GCGGTCTTCA CCAATCTCTC ACCCGACCAT CTGGACCGCC ACGGCGGGAT GGGCGGCTAT TTCGCGGCCA AGCGCCGGCT TTTTGCCGAA GGGGGGCCAG ACCGCGCCGT GATCGGCGTG GACGAGCCCG AGGGCCTCTA TCTCGCGGGG CAGCTTTCGG TCGCGCCCGA GGACGACCGG GTGATCCGCA TCTCGGCCGG CCAGAAGCTC GAGCGGTTCG GCTGGGCGGT CTTTGCCCGC AAGGGCTTTC TGGCGGAATG GCGCAAGGGG CGGCAGATGG CCTCGATCGA CCTGCGCGCC ATGCCGGGCC TGCCCGGTGC TCACAATCAC CAGAACGCCT GTGCCGCCTA CGCCGCCTGC CGGACGCTGG GGCTCGCGCC GCGCCAGATC GAGGAGGCGC TCGGCTCGTT CAAGGGGCTC CCGCACCGGA GCCAGCTGGT CGGCGAGCGA AACGGCGTGC GCTTCGTGAA CGATTCCAAG GCCACCAACG TGGACAGCGC GGCCAAGGCG CTGCAGGCCT TTCCGAAGAT CCGCTGGATC GCGGGGGGCC TGGGCAAGGA TGGCGGGATC GCGGCGCTGC GTCCGCATCT CGACGCGGTG GTGAAGGCCT ATCTCATCGG CCATTCGGCA CGGGACTTCG CGCTTCAGAT GGGGGCCACG GACCACGAGA TCTGCGAGAC GATGGACCGG GCGGTCGTCC GCGCGGCCGA GGAGGCGCAG CCGGGAGAGG TGGTTCTGCT GGCCCCGGCC GCCGCGAGCT TCGACCAGTA CCCGAACTTC GAAAAGCGGG GCGAAGATTT CATGGAGCGG GTGAAGGCGC TTCTTTGA
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Protein sequence | MIPVRGLEGR KVAVLGLGRS GLATARALQA GGAEPLLWDD SPEARANAEG QGFAVTDLTR ERAFEDVALL VTSPGIPHLY PAPNPVIARA MAAGVPVDND IGLFFRSFAT RDWDAFDQMP RVVCVTGSNG KSTTTALIHH ILAESGRPTQ MAGNIGRGVL DLDPARDGEV VVLELSSYQT DLARALTPDV AVFTNLSPDH LDRHGGMGGY FAAKRRLFAE GGPDRAVIGV DEPEGLYLAG QLSVAPEDDR VIRISAGQKL ERFGWAVFAR KGFLAEWRKG RQMASIDLRA MPGLPGAHNH QNACAAYAAC RTLGLAPRQI EEALGSFKGL PHRSQLVGER NGVRFVNDSK ATNVDSAAKA LQAFPKIRWI AGGLGKDGGI AALRPHLDAV VKAYLIGHSA RDFALQMGAT DHEICETMDR AVVRAAEEAQ PGEVVLLAPA AASFDQYPNF EKRGEDFMER VKALL
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