| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0690 |
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| Symbol | murD |
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| ID | 5082960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 698151 |
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| End bp | 699548 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640482248 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001166901 |
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| Protein GI | 146276742 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.451277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCCG TCCGTGGCCT CGAGGGCCGA AAGGTGGCCG TGCTGGGCCT CGGCCGCTCG
GGCCTTGCCA CCGCCCGTGC GCTGCAAGCC GGGGGCGCCG AGCCGCTCCT CTGGGACGAC
AGTCCCGAGG CGCGGGCCAA TGCCGAGGGG CAGGGCTTCG CGGTGACGGA TCTCACGCGC
GAGCGGGCGT TCGAGGATGT GGCGCTGCTT GTGACCAGCC CCGGCATCCC GCATCTCTAT
CCGGCGCCGA ACCCGGTGAT CGCCCGCGCG ATGGCTGCGG GCGTGCCGGT GGACAATGAC
ATCGGCCTCT TCTTCCGAAG CTTTGCCACG CGCGACTGGG ACGCGTTCGA CCAGATGCCG
CGCGTGGTCT GCGTCACCGG CTCGAACGGC AAATCCACGA CGACCGCGCT GATCCATCAC
ATCCTCGCCG AGAGCGGTCG GCCCACCCAG ATGGCGGGCA ACATTGGCCG GGGTGTCCTC
GATCTCGACC CGGCCCGCGA CGGCGAGGTG GTGGTGCTGG AACTCTCCTC CTACCAGACC
GATCTGGCGC GCGCGCTGAC GCCGGATGTG GCGGTCTTCA CCAATCTCTC ACCCGACCAT
CTGGACCGCC ACGGCGGGAT GGGCGGCTAT TTCGCGGCCA AGCGCCGGCT TTTTGCCGAA
GGGGGGCCAG ACCGCGCCGT GATCGGCGTG GACGAGCCCG AGGGCCTCTA TCTCGCGGGG
CAGCTTTCGG TCGCGCCCGA GGACGACCGG GTGATCCGCA TCTCGGCCGG CCAGAAGCTC
GAGCGGTTCG GCTGGGCGGT CTTTGCCCGC AAGGGCTTTC TGGCGGAATG GCGCAAGGGG
CGGCAGATGG CCTCGATCGA CCTGCGCGCC ATGCCGGGCC TGCCCGGTGC TCACAATCAC
CAGAACGCCT GTGCCGCCTA CGCCGCCTGC CGGACGCTGG GGCTCGCGCC GCGCCAGATC
GAGGAGGCGC TCGGCTCGTT CAAGGGGCTC CCGCACCGGA GCCAGCTGGT CGGCGAGCGA
AACGGCGTGC GCTTCGTGAA CGATTCCAAG GCCACCAACG TGGACAGCGC GGCCAAGGCG
CTGCAGGCCT TTCCGAAGAT CCGCTGGATC GCGGGGGGCC TGGGCAAGGA TGGCGGGATC
GCGGCGCTGC GTCCGCATCT CGACGCGGTG GTGAAGGCCT ATCTCATCGG CCATTCGGCA
CGGGACTTCG CGCTTCAGAT GGGGGCCACG GACCACGAGA TCTGCGAGAC GATGGACCGG
GCGGTCGTCC GCGCGGCCGA GGAGGCGCAG CCGGGAGAGG TGGTTCTGCT GGCCCCGGCC
GCCGCGAGCT TCGACCAGTA CCCGAACTTC GAAAAGCGGG GCGAAGATTT CATGGAGCGG
GTGAAGGCGC TTCTTTGA
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| Protein sequence | MIPVRGLEGR KVAVLGLGRS GLATARALQA GGAEPLLWDD SPEARANAEG QGFAVTDLTR
ERAFEDVALL VTSPGIPHLY PAPNPVIARA MAAGVPVDND IGLFFRSFAT RDWDAFDQMP
RVVCVTGSNG KSTTTALIHH ILAESGRPTQ MAGNIGRGVL DLDPARDGEV VVLELSSYQT
DLARALTPDV AVFTNLSPDH LDRHGGMGGY FAAKRRLFAE GGPDRAVIGV DEPEGLYLAG
QLSVAPEDDR VIRISAGQKL ERFGWAVFAR KGFLAEWRKG RQMASIDLRA MPGLPGAHNH
QNACAAYAAC RTLGLAPRQI EEALGSFKGL PHRSQLVGER NGVRFVNDSK ATNVDSAAKA
LQAFPKIRWI AGGLGKDGGI AALRPHLDAV VKAYLIGHSA RDFALQMGAT DHEICETMDR
AVVRAAEEAQ PGEVVLLAPA AASFDQYPNF EKRGEDFMER VKALL
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