Gene Rsph17025_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0675 
Symbol 
ID5082945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp678181 
End bp678543 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content64% 
IMG OID640482233 
ProductXRE family transcriptional regulator 
Protein accessionYP_001166886 
Protein GI146276727 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00325967 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAACATC CTGTCGACGC CCATGTGGGA AAGCGCATCC GCCACCGCCG GTGGATGGTG 
GGCATGACGC AGCAACAGCT TGCCGATTGC GTGGGCATCA AGTTCCAGCA GATCCAGAAA
TATGAAACCG GCATGAACCG GGTCAGCGCC TCGCGTCTGT GGGACATCGC CGAAGCCCTG
GGCGTCTCGA TCAGCTTCTT CTTCGAGGGG CTCGAGGGTG CGGGCGATCA GGCGCGTCAG
GCCGAGGGTG ACCGCATCAC CGACAAGGAG GCGCTCGAGT TGGTCCGCTC CTACTACGCG
ATCCCCGAGG CGCAGCGTCG CCGCCTGTTC GACCTCGCCC GCGTGCTGTC CGAAGCGGCC
TAG
 
Protein sequence
MKHPVDAHVG KRIRHRRWMV GMTQQQLADC VGIKFQQIQK YETGMNRVSA SRLWDIAEAL 
GVSISFFFEG LEGAGDQARQ AEGDRITDKE ALELVRSYYA IPEAQRRRLF DLARVLSEAA