Gene Rsph17025_0671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0671 
Symbol 
ID5082941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp674696 
End bp675436 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content64% 
IMG OID640482229 
Producthypothetical protein 
Protein accessionYP_001166882 
Protein GI146276723 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.435313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00362929 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTGAGT ATCAGACGGT GCGTTCGGTC GGCGCAGGCG CCCGGGCGGC CAGGATCGAC 
GAGGGCCTGC GCGCCCACAT GAACAAGGTC TACGGGCTGA TGTCGGTCGG GATGCTGCTG
ACCGGCGGCG TGGCCTGGGC CGTCGGGACC AGCGAGCAGC TCTTCTCGCT GCTGCGCGAC
CCGGTGACGA TGAGCCCGAA CATCCTCGGC TGGATCGTGA TGTTTGCCCC GCTGGTGATG
GTCTTCGCCT TCGGCGCGGT GCTGAACCGT CTGAGCCAGG CCGCTGCGCA ACTCTTCTTC
TACGCCTATG CGGCCGTGAT GGGCCTGTCG CTGAGCTGGA TCTTCGTGGC CTTCACCGGC
GTGTCGATCG CGCAGACTTT CCTGATCACC GCGATCGCCT TCGCGAGCCT CTCGCTCTTC
GGCTACACGA CGAAGAAGGA CCTCTCGGGC TTCGGCACGT TCCTGATCAT GGGCGTGGTG
GGCCTGATCG TGGCGATGAT CGTGAACATC TTCCTCGCCT CGTCGGCGCT GGCCTTCGCG
ATCTCGGTGA TCGGCGTGCT GATCTTTGCC GGCCTCACCG CCTACGACAC GCAGAACATC
AAGAACACCT ACCTGCAGCA CGCCCACAGC GGCGATGCCG AGTGGCTGGG CAAGGCCGCC
ATCATGGGCG CGCTGCAGCT CTACCTCGAT TTCATCAACC TGTTCATGTT CCTGCTGCAG
TTCATGGGCA ACCGCGAGTA A
 
Protein sequence
MAEYQTVRSV GAGARAARID EGLRAHMNKV YGLMSVGMLL TGGVAWAVGT SEQLFSLLRD 
PVTMSPNILG WIVMFAPLVM VFAFGAVLNR LSQAAAQLFF YAYAAVMGLS LSWIFVAFTG
VSIAQTFLIT AIAFASLSLF GYTTKKDLSG FGTFLIMGVV GLIVAMIVNI FLASSALAFA
ISVIGVLIFA GLTAYDTQNI KNTYLQHAHS GDAEWLGKAA IMGALQLYLD FINLFMFLLQ
FMGNRE